@TOME V2.3
(Mar 2018)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Modeled complexes Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor model: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : spr0100: (2017-12-15 )
MIELKNITKTIGGKVILDNLSLRIDQGDLVAIVGKSGSGKSTLLNLLGLIDGDYSGRYEIFGQTNLAVNSAKSQTIIREHISYLFQNFALIDDETVEYNLMLALKYVKLPKKDKLKKVEEILERVGLSATLHQRVSELSGGEQQRIAVARAILKPSQLILADEPTGSLDPENRDLVLKFLLEMNREGKTVIIVTHDAYVAQQCHRVIELGEGK

Atome Classification :

(30 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

ANP_J_5(3C41)
?
[Raw transfer]



ATP_J_5(4YMU)
?
[Raw transfer]



ATP_A_5(1B0U)
HISP_SALTY
[Raw transfer]



ATP_A_6(4YMV)
?
[Raw transfer]



AGS_B_6(3C4J)
?
[Raw transfer]



ATP_A_7(4YMU)
?
[Raw transfer]



ANP_K_6(3C41)
?
[Raw transfer]



ATP_B_6(1L2T)
Y796_METJA
[Raw transfer]



ATP_A_5(1L2T)
Y796_METJA
[Raw transfer]



ACP_A_4(5X40)
CBIO_RHOCB
[Raw transfer]



AGS_A_4(3C4J)
?
[Raw transfer]



ACP_A_4(4AYX)
ABCBA_HUMAN
[Raw transfer]



ADP_A_3(1F3O)
Y796_METJA
[Raw transfer]



ADP_A_3(3TIF)
Y796_METJA
[Raw transfer]



128_A_2(2PMK)

[Raw transfer]



ADP_B_8(3TIF)
Y796_METJA
[Raw transfer]



AT4_D_8(2OLK)
?
[Raw transfer]



AT4_B_6(2OLK)
?
[Raw transfer]



ADP_B_2(2FF7)

[Raw transfer]
2 PsiBlast_PDB 94.2641% 0 - C- -5NIL - ? -
1 PsiBlast_PDB 94.2641% 0 - C- -5NIK - ? -
125 HHSearch 83.0437%-111 - C1 -2PCL - LOLD_AQUAE -
18 PsiBlast_PDB 79.8233% -73 - C1 -4U00 - ? -
4 PsiBlast_PDB 78.7737%-101 - C1 -2PCL - LOLD_AQUAE -
19 PsiBlast_PDB 78.5733% -71 - C1 -4U02 - ? -
109 HHSearch 77.4430%-135 - C1 -3RLF - MALK_ECOLI -
60 PsiBlast_CBE 77.4233%-121 - C1 -2YYZ - ? -
110 HHSearch 76.4931%-122 - C1 -3FVQ - FBPC_NEIG1 -
3 PsiBlast_PDB 76.4337% -98 - C1 -2PCJ - LOLD_AQUAE -
108 HHSearch 75.9430%-126 - C1 -2AWN - MALK_ECOLI -
118 HHSearch 71.9732%-117 - C1 -2YYZ - ? -
46 PsiBlast_CBE 71.8334% -37 - C1 -4YMU 5.3 ?
22 PsiBlast_CBE 71.7437% 26 - C1 -1L2T 5.1 Y796_METJA
10 PsiBlast_PDB 71.3235% -49 - C1 -2OUK - ? -
20 PsiBlast_PDB 70.9234% -34 - C1 -4YMS - ? -
44 PsiBlast_CBE 70.7834% -41 - C1 -4YMV 5.9 ?
45 PsiBlast_CBE 70.5734% -37 - C1 -4YMU 5.3 ?
5 PsiBlast_PDB 70.4137% 23 - C1 -1L2T 5.0 Y796_METJA
43 PsiBlast_CBE 70.3434% -36 - C1 -4YMV - ? -
29 PsiBlast_CBE 70.1235% -43 - C1 -2OLK 4.6 ?
23 PsiBlast_CBE 70.1136% 26 - C1 -3TIF 4.8 Y796_METJA
31 PsiBlast_CBE 69.7135% -47 - C1 -2OLK 4.7 ?
6 PsiBlast_PDB 68.3836% 23 - C1 -3TIF 4.8 Y796_METJA
61 PsiBlast_CBE 68.2733% -5 - C1 -1B0U 5.2 HISP_SALTY
7 PsiBlast_PDB 67.6537% 33 - C1 -1F3O 5.9 Y796_METJA
14 PsiBlast_PDB 67.3935% -45 - C1 -3C41 5.7 ?
33 PsiBlast_CBE 67.0735% -48 - C1 -3C41 5.4 ?
64 PsiBlast_CBE 51.3531% -26 - C1 -2FF7 4.8
66 PsiBlast_CBE 49.8831% -28 - C1 -2PMK 4.9