@TOME V2.3
(Mar 2018)

Ref. - - Doc.
Global output mode :
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Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Modeled complexes Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor model: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : spr0106: (2017-12-15 )
MVLHSIKRNSKFYVADPASGIRKMSSDELGEIYQGITLFMVPNSDFERGKLKGKGLLDLFGRLIFNQKGLISTVILASFVLSIIGILSSLFSKVIMDEVIPYALKNSLYMFLIVFGIVSFLQTLLSAFRQHVLLFLSRKIDIPVLMGYYDHIIHLPYSFFGSRRVGDVLTRFQDAMTIKNVFTSVSISLVMDITLSVISAVVLWTINQSLFLILVFMVIVNIILIYCFKKPYKKINHEQMEANGLLNSQLIESIRNIDTIKSQHDEEQRLNKIEEKFVHTLEIGYKEGVLQNIQSTISSMTSTMGGLLFMGVGALFIIDGKMTIGDLLVFQTLSQYFTEPIQNLVGLQLTFQEVQVAVSRLQELMEVDREDIALDYSIRDFTLCDDIEFKDVTFAYGSRPPVIKNFNLRIKQGEKIAFVGESGAGKSTLVRLLLRFINPNEGKICIGANDLSDLDYGKLRKKISYIPQTIELFTGTIIDNLKIGNPSVTYEDMVRVCRIVGIHDTIQRLQNRYGSFVEEGGQNFSGGEKQRLAIARALLSKADLYIFDEATSNLDSFSEQIIQDLIFNKIMDKTTIVVAHRLSTILRCDKICFLENGTIVEYGTHEELMAKNGKYARMVGLQSVQVNQQIQSQAVLDTEEVTYG

Atome Classification :

(22 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

ANP_B_7(2ONJ)
Y1866_STAAM
[Raw transfer]



ANP_A_8(2ONJ)
Y1866_STAAM
[Raw transfer]



ATP_E_5(2FGJ)
HLYBP_ECOLX
[Raw transfer]



AGS_A_3(4S0F)
?
[Raw transfer]



ACP_A_4(4AYT)
ABCBA_HUMAN
[Raw transfer]



ATP_B_10(1XEF)
HLYBP_ECOLX
[Raw transfer]



ACP_A_4(4AYX)
ABCBA_HUMAN
[Raw transfer]



ADP_A_2(3NHB)

[Raw transfer]



128_A_2(2PMK)

[Raw transfer]



ATP_G_7(2FGJ)
HLYBP_ECOLX
[Raw transfer]



12D_A_2(3B5J)

[Raw transfer]



ATP_A_2(3NH9)

[Raw transfer]



AGS_B_4(4S0F)
?
[Raw transfer]



ADP_A_5(3B5Z)
MSBA_SALTY
[Raw transfer]
91 HHSearch 85.3437% - - C2 -4RY2 - ? -
90 HHSearch 85.2937% - - C2 -4RY2 - ? -
1 PsiBlast_PDB 84.5837% - - C2 -4RY2 - ? -
21 PsiBlast_CBE 65.6737% -46 - C2 -4S0F 1.3 ?
2 PsiBlast_PDB 65.4337% -45 * C2 *4S0F 2.5 ?
110 HHSearch 63.6025% -60 - C2 -5MKK - ? -
105 HHSearch 63.2528% -55 - C2 -3QF4 - Y288_THEMA -
16 PsiBlast_PDB 61.0130% 0 - C- -4F4C - PGP1_CAEEL -
98 HHSearch 59.7830% -30 - C2 -4A82 - Y1866_STAAM -
104 HHSearch 59.4528% - - C2 -4Q4H - Y288_THEMA -
97 HHSearch 57.2923% -56 - C2 -5MKK - ? -
99 HHSearch 57.0825% - - C2 -3B5X - MSBA_VIBCH -
94 HHSearch 56.9425% -27 - C2 -4AYX - ABCBA_HUMAN -
17 PsiBlast_PDB 56.2628% - - C2 -3B5X - MSBA_VIBCH -
8 PsiBlast_PDB 56.1429% - - C2 -4Q4H - Y288_THEMA -
6 PsiBlast_PDB 55.6329% -38 - C2 -3QF4 - Y288_THEMA -
11 PsiBlast_PDB 55.6028% - - C2 -3B5Z 2.3 MSBA_SALTY
10 PsiBlast_PDB 55.4828% - - C2 -3B5Y - MSBA_SALTY -
7 PsiBlast_PDB 55.3529% -38 - C2 -4Q4A - Y288_THEMA -
9 PsiBlast_PDB 55.3328% -38 - C2 -4Q4J - Y288_THEMA -
41 PsiBlast_CBE 39.9341% -29 - C2 -2FGJ 7.4 HLYBP_ECOLX
43 PsiBlast_CBE 38.5941% -28 - C2 -2FGJ 7.6 HLYBP_ECOLX