@TOME V2.3
(Mar 2018)

Ref. - - Doc.
Global output mode :
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Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Modeled complexes Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor model: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : spr0160: (2017-12-16 )
MSHIIELPEMLANQIAAGEVIERPASVVKELVENAIDAGSSQIIIEIEEAGLKKVQITDNGHGIAHDEVELALRRHATSKIKNQADLFRIRTLGFRGEALPSIASVSVLTLLTAVDGASHGTKLVARGGEVEEVIPATSPVGTKVCVEDLFFNTPARLKYMKSQQAELSHIIDIVNRLGLAHPEISFSLISDGKEMTRTAGTGQLRQAIAGIYGLVSAKKMIEIENSDLDFEISGFVSLPELTRANRNYISLFINGRYIKNFLLNRAILDGFGSKLMVGRFPLAVIHIHIDPYLADVNVHPTKQEVRISKEKELMTLVSEAIANSLKEQTLIPDALENLAKSTVRNREKVEQTILPLKENTLYYEKTEPSRPSQTEVADYQVELTDEGQDLTLFAKETLDRLTKPAKLHFAERKPANYDQLDHPELDLASIDKAYDKLEREEASSFPELEFFGQMHGTYLFAQGRDGLYIIDQHAAQERVKYEEYRESIGNVDQSQQQLLVPYIFEFPADDALRLKERMPLLEEVGVFLAEYGENQFILREHPIWMAEEEIESGIYEMCDMLLLTKEVSIKKYRAELAIMMSCKRSIKANHRIDDHSARQLLYQLSQCDNPYNCPHGRPVLVHFTKSDMEKMFRRIQENHTSLRELGKY

Atome Classification :

(21 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

ANP_A_5(1B63)
MUTL_ECOLI
[Raw transfer]



ANP_A_5(1B63)
MUTL_ECOLI
[Raw transfer]



ANP_A_5(1B63)
MUTL_ECOLI
[Raw transfer]



ANP_A_5(1B63)
MUTL_ECOLI
[Raw transfer]



ANP_A_5(1B63)
MUTL_ECOLI
[Raw transfer]



ANP_A_4(1NHJ)
MUTL_ECOLI
[Raw transfer]



ADP_A_3(1B62)
MUTL_ECOLI
[Raw transfer]



ANP_A_9(1NHH)
MUTL_ECOLI
[Raw transfer]



ANP_A_6(1NHI)
MUTL_ECOLI
[Raw transfer]



SAP_A_4(1H7U)
PMS2_HUMAN
[Raw transfer]
21 HHSearch 83.0742% -41 - C1 -1B63 10.2 MUTL_ECOLI
6 PsiBlast_PDB 82.3442% -34 - C1 -1NHJ 10.2 MUTL_ECOLI
7 PsiBlast_PDB 81.2341% -41 - C1 -1B63 10.2 MUTL_ECOLI
4 PsiBlast_PDB 80.9641% -36 - C1 -1B62 7.5 MUTL_ECOLI
9 PsiBlast_PDB 79.4941% -40 - C1 -1NHI 10.1 MUTL_ECOLI
43 Fugue 77.6042% 19 * C1 *1B63 10.2 MUTL_ECOLI
8 PsiBlast_PDB 75.8641% -27 - C1 -1NHH 10.1 MUTL_ECOLI
3 PsiBlast_PDB 72.5541% -88 - C1 -5AKD - MUTL_ECOLI -
1 PsiBlast_PDB 69.5941% -81 - C1 -5AKB - MUTL_ECOLI -
2 PsiBlast_PDB 68.6241% -80 - C1 -5AKC - MUTL_ECOLI -
23 HHSearch 66.9527% -39 - C1 -1H7S - PMS2_HUMAN -
10 PsiBlast_PDB 66.4446%-140 - C2 -3GAB - MUTL_BACSU -
24 HHSearch 65.9926% -21 - C1 -3H4L - PMS1_YEAST -
5 PsiBlast_PDB 65.6441% -47 - C1 -1BKN - MUTL_ECOLI -
45 Fugue 63.5526% -38 - C1 -1H7S - PMS2_HUMAN -
12 PsiBlast_PDB 63.1746%-138 - C2 -3KDK - MUTL_BACSU -
16 PsiBlast_PDB 61.9224% -18 - C1 -3H4L - PMS1_YEAST -
15 PsiBlast_PDB 55.0528% -42 - C1 -1H7S - PMS2_HUMAN -
13 PsiBlast_PDB 53.0428% -45 - C1 -1H7U 4.0 PMS2_HUMAN
44 Fugue 52.9547% -33 - C1 -1B63 9.7 MUTL_ECOLI
47 Fugue 45.4548% 44 - C1 -1B63 9.7 MUTL_ECOLI