@TOME V2.3
(Mar 2018)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Modeled complexes Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor model: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : spr0162: (2017-12-16 )
MEYRKIQEALEALQKGRLVLVIDDKDRENEGDLICSAQAATTENVNFMATYAKGLICMPMSESLANQLMLSPMVENNTDNHKTAFTVSIDYKETTTGISAEERGLTARMCVAEDITPSDFRRPGHMFPLIAKKGGVLERNGHTEATVDLLKLAGLKECGLCCEIMNHDGKMMRTDDLIQFSKKHNIPLITIKELQEYRKVYDQLVERVSTVNMPTRYGNFKAISYIDKLNGEHHLALIMGNIEDEANVLCRVHSECLTGDVLGSLRCDCGQQFDKAMKMIVENGSGVLLYLRQEGRGIGLINKLKAYHLQDQGMDTLDANLALGFEGDLRKYHIGAQMLKDLGLQSLHLLTNNPDKVEQLEKYGITISSRISIEIEANPYDSFYLETKKNRMGHILNMEEK

Atome Classification :

(31 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

5RP_D_4(1TKU)
RIB3_CANAL
[Raw transfer]



5RP_D_4(1TKU)
RIB3_CANAL
[Raw transfer]



5RP_B_5(4P77)
RIBB_VIBCH
[Raw transfer]



5RP_A_3(4P77)
RIBB_VIBCH
[Raw transfer]



RES_B_7(4P6P)
RIBB_VIBCH
[Raw transfer]



RES_A_3(4P6P)
RIBB_VIBCH
[Raw transfer]



RES_B_7(4P6P)
RIBB_VIBCH
[Raw transfer]



5RP_C_3(1TKU)
RIB3_CANAL
[Raw transfer]



5SP_A_3(3LQU)
RIBB_SALTY
[Raw transfer]



5RP_A_3(4P8E)
RIBB_VIBCH
[Raw transfer]



5RP_A_2(2RIU)
RIB3_CANAL
[Raw transfer]



5RP_B_8(4P8E)
RIBB_VIBCH
[Raw transfer]



GOL_A_8(4FFJ)
?
[Raw transfer]



GOL_A_8(4FFJ)
?
[Raw transfer]



GOL_A_5(1K4O)
RIB3_MAGO7
[Raw transfer]



RES_B_4(4P6C)
RIBB_VIBCH
[Raw transfer]



GOL_A_5(1K4O)
RIB3_MAGO7
[Raw transfer]



RES_A_3(4P6C)
RIBB_VIBCH
[Raw transfer]



GOL_B_10(3MIO)
RIBBA_MYCTA
[Raw transfer]



GOL_A_5(3MIO)
RIBBA_MYCTA
[Raw transfer]



GOL_A_5(3MIO)
RIBBA_MYCTA
[Raw transfer]



GOL_B_12(3MIO)
RIBBA_MYCTA
[Raw transfer]



GOL_B_12(3MIO)
RIBBA_MYCTA
[Raw transfer]



EDO_A_3(4P6D)
RIBB_VIBCH
[Raw transfer]
2 PsiBlast_PDB 81.7448% -66 - C4 -4I14 - RIBBA_MYCTA -
1 PsiBlast_PDB 79.53100%-124 - C4 -4FFJ 3.0 ?
82 HHSearch 79.50100%-124 - C4 -4FFJ 3.0 ?
29 PsiBlast_CBE 66.4150% -77 - C4 -1TKU 3.2 RIB3_CANAL
14 PsiBlast_PDB 66.3750% -79 - C4 -2RIS - RIB3_CANAL -
83 HHSearch 66.3649% -76 - C4 -2RIS - RIB3_CANAL -
15 PsiBlast_PDB 66.2550% -75 - C4 -2RIU 3.5 RIB3_CANAL
84 HHSearch 66.2449% -75 - C4 -1TKU 3.2 RIB3_CANAL
12 PsiBlast_PDB 66.1350% -80 - C4 -1TKS - RIB3_CANAL -
13 PsiBlast_PDB 66.0450% -75 - C4 -1TKU 3.1 RIB3_CANAL
19 PsiBlast_PDB 65.7045% -84 - C4 -3LS6 - RIBB_SALTY -
34 PsiBlast_CBE 65.3145% -87 - C4 -3LQU - RIBB_SALTY -
85 HHSearch 64.8145% -76 - C4 -4P6P 4.3 RIBB_VIBCH
6 PsiBlast_PDB 64.8146% -75 - C4 -4P6C 4.7 RIBB_VIBCH
24 PsiBlast_CBE 64.6646% -76 - C4 -4P8E 4.1 RIBB_VIBCH
26 PsiBlast_CBE 64.6446% -76 - C4 -4P6P 4.3 RIBB_VIBCH
9 PsiBlast_PDB 64.5646% -75 - C4 -4P77 4.6 RIBB_VIBCH
3 PsiBlast_PDB 64.1947% -89 - C4 -1G57 - RIBB_ECOLI -
93 HHSearch 64.1747% -86 - C4 -1G57 - RIBB_ECOLI -
10 PsiBlast_PDB 64.1446% -79 - C4 -4P8E 3.9 RIBB_VIBCH
17 PsiBlast_PDB 64.0545% -86 - C4 -3LQU 3.5 RIBB_SALTY
28 PsiBlast_CBE 63.9446% -74 - C4 -4P6C 4.8 RIBB_VIBCH
7 PsiBlast_PDB 63.9046% -85 - C4 -4P6D 2.7 RIBB_VIBCH
8 PsiBlast_PDB 63.6046% -78 - C4 -4P6P 4.2 RIBB_VIBCH
35 PsiBlast_CBE 62.8645% -85 - C4 -3MIO 3.1 RIBBA_MYCTA
25 PsiBlast_CBE 62.6346% -81 - C4 -4P77 5.0 RIBB_VIBCH
87 HHSearch 62.3241% -43 - C4 -1K4O 3.5 RIB3_MAGO7
91 HHSearch 62.1746% -81 * C4 *3MIO 2.7 RIBBA_MYCTA
92 HHSearch 61.9746% -84 - C4 -3MIO 2.7 RIBBA_MYCTA
36 PsiBlast_CBE 61.8645% -89 - C4 -3MIO 2.7 RIBBA_MYCTA
39 PsiBlast_CBE 61.6541% -63 - C4 -1K4O 3.5 RIB3_MAGO7