@TOME V2.3
(Mar 2018)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Modeled complexes Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor model: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : spr0163: (2017-12-16 )
MFTGIIEEIGKVERIQKDSRNCKLSIKASKILTDIHLGDSIAVNGICLTVTHFNHQSFTVDVMNETWSRTALTLLKHGSEVNLERALSVNGRLGGHVVTGHIDGTGKISSIKKDDNAVWHQINTQKEILDLIVEKGSITIDGISLTVAKVSKVNFSVSVIPHTLEQTILKSKQVGSTVNLENDILGKYVQKLMDNSPKSEISKELLYQNGF

Atome Classification :

(20 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

CRM_A_4(1KZL)
RISA_SCHPO
[Raw transfer]




CRM_A_4(1KZL)
RISA_SCHPO
[Raw transfer]




39 HHSearch 82.2242% -6 - C2 -1KZL 6.1 RISA_SCHPO
1 PsiBlast_PDB 81.1443% -5 - C2 -1KZL 6.1 RISA_SCHPO
40 HHSearch 79.6836% -23 - C2 -1I8D - RISA_ECOLI -
42 HHSearch 78.2637% -6 - C2 -4GQN - RISA_BRUA2 -
3 PsiBlast_PDB 78.0337% -23 - C2 -4FXU - RISA_BRUA2 -
41 HHSearch 77.9237% -18 - C2 -4G6I - RISA_BRUA2 -
25 PsiBlast_CBE 76.2337% -7 - C2 -4E0F - RISA_BRUA2 -
24 PsiBlast_CBE 75.8537% -19 - C2 -4G6I - RISA_BRUA2 -
5 PsiBlast_PDB 75.5937% -11 - C2 -4GQN - RISA_BRUA2 -
29 Fugue 75.4134% -18 - C2 -1I8D - RISA_ECOLI -
2 PsiBlast_PDB 75.1937% -10 - C2 -4E0F - RISA_BRUA2 -
4 PsiBlast_PDB 75.0537% -12 - C2 -4G6I - RISA_BRUA2 -
23 PsiBlast_CBE 74.6137% -12 - C2 -4G6I - RISA_BRUA2 -
6 PsiBlast_PDB 70.4238% 17 - C2 -1I8D - RISA_ECOLI -
49 HHSearch 59.4128% -92 - C2 -3A35 - ? -
50 HHSearch 58.7630%-102 - C2 -1I8D - RISA_ECOLI -
43 HHSearch 58.2825% 8 - C2 -3A35 - ? -
44 HHSearch 55.7726% -12 - C2 -3DDY - LUXP_PHOLE -
7 PsiBlast_PDB 55.0327% 8 - C2 -3A35 - ? -
8 PsiBlast_PDB 54.7627% 23 - C2 -3A3B - ? -