@TOME V2.3
(Mar 2018)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Modeled complexes Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor model: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : spr0166: (2017-12-16 )
MTKRCSWVKMTNPLYIAYHDEEWGQPLHDDQALFELLCMETYQAGLSWETVLNKRQAFREAFHSYQIHSVAEMTDTELEAMLENPAIIRNRAKIFATRANAQAFLQLQAEYGSFDAYLWSFVEGKTVVNDVPDYRQAPAKTPLSEKLAKDLKKRGFKFTGPVAVLSFLQAAGLVDDHENDCEWKGLK

Atome Classification :

(23 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

ADK_D_15(4AIA)
?
[Raw transfer]



ADK_A_6(2OFI)
?
[Raw transfer]



ADK_B_10(4AIA)
?
[Raw transfer]



ADK_C_12(4AIA)
?
[Raw transfer]



ADK_E_17(4AIA)
?
[Raw transfer]



ADK_A_7(4AIA)
?
[Raw transfer]



ADK_B_10(4AI5)
?
[Raw transfer]



ADK_C_13(4AI5)
?
[Raw transfer]



ADK_E_18(4AI5)
?
[Raw transfer]



ADK_A_7(4AI5)
?
[Raw transfer]



PGE_A_5(2OFK)
?
[Raw transfer]



PGE_B_6(2OFK)
?
[Raw transfer]



ADK_D_16(4AI5)
?
[Raw transfer]



PGE_B_6(2OFK)
?
[Raw transfer]



PGE_B_12(2OFK)
?
[Raw transfer]



NACID_C_1(2OFI)
?
[Raw transfer]
-
NACID_C_1(2OFI)
?
[Raw transfer]
-
NACID_B_2(2OFI)
?
[Raw transfer]
-
31 HHSearch 91.4146%-126 - C4 -2OFK 2.5 ?
1 PsiBlast_PDB 90.8947%-129 - C4 -2OFK 2.5 ?
21 PsiBlast_CBE 90.6047%-132 - C4 -2OFK 2.9 ?
30 HHSearch 90.2346%-123 - C4 -2OFI 4.0 ?
2 PsiBlast_PDB 88.8246%-129 - C4 -2OFI 4.4 ?
4 PsiBlast_PDB 86.7545%-124 - C4 -1NKU - 3MG1_ECOLI -
32 HHSearch 85.7842%-104 - C4 -2JG6 - ? -
51 Fugue 85.3544%-115 - C4 -1LMZ - 3MG1_ECOLI -
3 PsiBlast_PDB 84.9145%-122 - C4 -1LMZ - 3MG1_ECOLI -
33 HHSearch 84.8442%-111 - C4 -4AI5 - ? -
29 PsiBlast_CBE 82.7644% -88 - C4 -4AI5 3.6 ?
5 PsiBlast_PDB 82.6345%-112 - C4 -1P7M - 3MG1_ECOLI -
28 PsiBlast_CBE 82.5744% -81 - C4 -4AI5 3.5 ?
24 PsiBlast_CBE 82.2844% -80 - C4 -4AIA 3.3 ?
25 PsiBlast_CBE 81.8844% -86 - C4 -4AIA 3.5 ?
8 PsiBlast_PDB 81.8844% -79 - C4 -4AI4 - ? -
23 PsiBlast_CBE 81.8344% -80 - C4 -4AIA 3.1 ?
26 PsiBlast_CBE 81.4044% -86 - C4 -4AI5 3.5 ?
6 PsiBlast_PDB 81.3944% -75 - C4 -2JG6 - ? -
27 PsiBlast_CBE 81.2144% -83 - C4 -4AI5 3.6 ?
9 PsiBlast_PDB 81.1144% -84 - C4 -4AI5 3.6 ?
22 PsiBlast_CBE 80.7844% -79 - C4 -4AIA 3.5 ?
7 PsiBlast_PDB 80.4744% -76 - C4 -4AIA 3.4 ?