@TOME V2.3
(Mar 2018)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Modeled complexes Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor model: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : spr0238: (2017-12-18 )
MSRILDNEIMGDEELVERTLRPQYLREYIGQDKVKDQLQIFIEAAKMRDEALDHVLLFGPPGLGKTTMAFVIANELGVNLKQTSGPVIEKAGDLVAILNELEPGDVLFIDEIHRLPMSVEEVLYSAMEDFYIDIMIGAGEGSRSVHLELPPFTLIGATTRAGMLSNPLRARFGITGHMEYYAHADLTEIVERTADIFEMEITHEAASELALRSRGTPRIANRLLKRVRDFAQIMGNGVIDDIITDKALTMLDVDHEGLDYVDQKILRTMIEMYSGGPVGLGTLSVNIAEERETVEDMYEPYLIQKGFIMRTRSGRVATAKAYEHLGYEYSEK

Atome Classification :

(20 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

ADP_A_2(1IN8)
RUVB_THEMA
[Raw transfer]




ADP_A_4(1IN7)
RUVB_THEMA
[Raw transfer]




ADP_A_5(1IN4)
RUVB_THEMA
[Raw transfer]




ADP_A_4(1IN6)
RUVB_THEMA
[Raw transfer]




ADP_A_2(1IN5)
RUVB_THEMA
[Raw transfer]




ADP_A_5(1IN4)
RUVB_THEMA
[Raw transfer]




ADP_A_2(1IN5)
RUVB_THEMA
[Raw transfer]




ATP_A_5(1J7K)
RUVB_THEMA
[Raw transfer]




ADP_A_3(3PFI)
RUVB_CAMJE
[Raw transfer]




ADP_A_3(3PFI)
RUVB_CAMJE
[Raw transfer]




ANP_C_3(1IXS)
RUVB_THET8
[Raw transfer]




ANP_C_3(1IXS)
RUVB_THET8
[Raw transfer]




ANP_M_13(1IXR)
RUVB_THET8
[Raw transfer]




ADE_B_6(1HQC)
RUVB_THET8
[Raw transfer]




ADE_B_6(1HQC)
RUVB_THET8
[Raw transfer]




ADE_A_5(1HQC)
RUVB_THET8
[Raw transfer]




ADE_A_5(1HQC)
RUVB_THET8
[Raw transfer]




1 PsiBlast_PDB 90.7756%-128 - C2 -1IN4 8.3 RUVB_THEMA
4 PsiBlast_PDB 90.7555%-130 - C2 -1IN8 8.6 RUVB_THEMA
127 HHSearch 89.7656%-127 - C2 -1IN4 8.4 RUVB_THEMA
5 PsiBlast_PDB 89.6755%-129 - C2 -1IN7 8.5 RUVB_THEMA
3 PsiBlast_PDB 89.1255%-128 - C2 -1IN6 8.2 RUVB_THEMA
6 PsiBlast_PDB 88.6455%-127 - C2 -1J7K 8.5 RUVB_THEMA
2 PsiBlast_PDB 87.6255%-121 - C2 -1IN5 7.9 RUVB_THEMA
128 HHSearch 87.3356%-122 - C2 -1IN5 7.9 RUVB_THEMA
131 HHSearch 83.9348%-120 - C2 -3PFI 8.2 RUVB_CAMJE
10 PsiBlast_PDB 82.8347%-117 - C2 -3PFI 8.2 RUVB_CAMJE
7 PsiBlast_PDB 77.7856% -26 - C2 -1IXS 6.0 RUVB_THET8
153 Fugue 77.3755% -19 - C2 -1HQC 3.2 RUVB_THET8
8 PsiBlast_PDB 76.2156% -22 - C2 -1HQC 3.2 RUVB_THET8
129 HHSearch 75.6856% -22 * C2 *1HQC 4.2 RUVB_THET8
21 PsiBlast_CBE 75.6556% -21 - C2 -1HQC 4.2 RUVB_THET8
130 HHSearch 74.8556% -26 - C2 -1IXS 6.0 RUVB_THET8
9 PsiBlast_PDB 70.3856% -30 - C2 -1IXR 5.0 RUVB_THET8
157 Fugue 40.3117% -8 - C2 -1IQP - RFCS_PYRFU -
146 HHSearch 40.2319% -21 - C2 -3D8B - -
160 Fugue 39.3218% 4 - C2 -5C3C - ? -