@TOME V2.3
(Mar 2018)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Modeled complexes Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor model: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : spr0240: (2017-12-18 )
MFGFFKKDKAVEVEVPTQVPAHIGIIMDGNGRWAKKRMQPRVFGHKAGMEALQTVTKAANKLGVKVITVYAFSTENWTRPDQEVKFIMNLPVEFYDNYVPELHANNVKIQMIGETDRLPKQTFEALTKAEELTKNNTGLILNFALNYGGRAEITQALKLISQDVLDAKINPGDITEELIGNYLFTQHLPKDLRDPDLIIRTSGELRLSNFLPWQGAYSELYFTDTLWPDFDEAALQEAILAYNRRHRRFGGV

Atome Classification :

(55 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

FPP_B_4(5KH4)
ISPT_STRPN
[Raw transfer]




B08_B_6(2E99)
UPPS_ECOLI
[Raw transfer]




FPP_A_4(4Q9M)
ISPT_STRR6
[Raw transfer]




FPP_B_15(4Q9M)
ISPT_STRR6
[Raw transfer]




FPP_B_15(4Q9M)
ISPT_STRR6
[Raw transfer]




H78_A_3(3WYJ)
UPPS_ECOLI
[Raw transfer]




GPP_A_6(2VG3)
DPDS_MYCTU
[Raw transfer]




GPP_D_19(2VG3)
DPDS_MYCTU
[Raw transfer]




IPE_A_4(1X07)
UPPS_ECOLI
[Raw transfer]




GPP_B_9(2VG3)
DPDS_MYCTU
[Raw transfer]




FPP_A_3(4H8E)
ISPT_STAAN
[Raw transfer]




FPS_C_3(1X08)
UPPS_ECOLI
[Raw transfer]




FPS_A_3(4U82)
ISPT_STAAN
[Raw transfer]




FPP_A_3(5KH4)
ISPT_STRPN
[Raw transfer]




FPP_A_3(4H8E)
ISPT_STAAN
[Raw transfer]




FPS_A_4(1X06)
UPPS_ECOLI
[Raw transfer]




FPS_A_3(4U82)
ISPT_STAAN
[Raw transfer]




IPE_A_3(1X09)
UPPS_ECOLI
[Raw transfer]




40B_B_4(4ONC)
DPDS_MYCTU
[Raw transfer]




GPP_C_15(2VG3)
DPDS_MYCTU
[Raw transfer]




GPP_C_15(2VG3)
DPDS_MYCTU
[Raw transfer]




DPO_A_5(2VG2)
DPDS_MYCTU
[Raw transfer]




DPO_C_20(2VG2)
DPDS_MYCTU
[Raw transfer]




B29_B_7(2E98)
UPPS_ECOLI
[Raw transfer]




FPP_C_3(1V7U)
UPPS_ECOLI
[Raw transfer]




B28_B_5(2E9A)
UPPS_ECOLI
[Raw transfer]




DPO_C_3(2DTN)
ISPT_HELPY
[Raw transfer]




B76_A_3(2E9D)
UPPS_ECOLI
[Raw transfer]




DST_B_7(5HXT)
ZFPS_SOLHA
[Raw transfer]




DST_A_4(5HXT)
ZFPS_SOLHA
[Raw transfer]




PIS_A_3(5HC8)
?
[Raw transfer]




DST_A_4(5HC7)
?
[Raw transfer]




PIS_A_3(5HC8)
?
[Raw transfer]




TH9_B_3(3TH8)
UPPS_ECOLI
[Raw transfer]




B08_A_5(2E99)
UPPS_ECOLI
[Raw transfer]




GOL_B_19(2VG2)
DPDS_MYCTU
[Raw transfer]




40B_A_3(4ONC)
DPDS_MYCTU
[Raw transfer]




B29_A_4(2E98)
UPPS_ECOLI
[Raw transfer]




IPR_C_8(5HXP)
ZFPS_SOLHA
[Raw transfer]




IPE_A_4(1X09)
UPPS_ECOLI
[Raw transfer]




IPE_A_4(1X09)
UPPS_ECOLI
[Raw transfer]




DST_A_3(5HXQ)
ZFPS_SOLHA
[Raw transfer]




IPE_B_15(2VG2)
DPDS_MYCTU
[Raw transfer]




B29_A_5(2E98)
UPPS_ECOLI
[Raw transfer]




B28_A_4(2E9A)
UPPS_ECOLI
[Raw transfer]




6TC_B_3(5KH5)
ISPT_STRPN
[Raw transfer]




IPE_A_6(2VG2)
DPDS_MYCTU
[Raw transfer]




IPR_A_3(5HXP)
ZFPS_SOLHA
[Raw transfer]




IPR_A_3(5HXP)
ZFPS_SOLHA
[Raw transfer]




2ZW_B_5(4Q9O)
ISPT_STRR6
[Raw transfer]




2ZW_A_3(4Q9O)
ISPT_STRR6
[Raw transfer]




2ZW_A_3(4Q9O)
ISPT_STRR6
[Raw transfer]




2BJ_A_7(3SGV)
UPPS_ECOLI
[Raw transfer]




B75_A_6(2E9C)
UPPS_ECOLI
[Raw transfer]




5 PsiBlast_PDB 95.15100% -93 - C8 -4Q9O 9.1 ISPT_STRR6
2 PsiBlast_PDB 95.14100%-103 - C8 -5KH4 5.5 ISPT_STRPN
22 PsiBlast_CBE 94.70100%-106 - C8 -5KH4 6.3 ISPT_STRPN
3 PsiBlast_PDB 94.11100%-104 - C8 -5KH5 - ISPT_STRPN -
24 PsiBlast_CBE 93.90100% -99 - C8 -4Q9M 9.2 ISPT_STRR6
21 PsiBlast_CBE 93.79100%-107 - C8 -5KH5 5.4 ISPT_STRPN
23 PsiBlast_CBE 93.67100% -96 - C8 -4Q9O 9.1 ISPT_STRR6
1 PsiBlast_PDB 93.64100%-110 - C8 -5KH2 - ISPT_STRPN -
4 PsiBlast_PDB 93.14100% -97 - C8 -4Q9M 9.2 ISPT_STRR6
87 HHSearch 91.77100% -66 - C8 -4Q9O 9.1 ISPT_STRR6
86 HHSearch 90.32100% -71 - C8 -4Q9M 9.2 ISPT_STRR6
88 HHSearch 79.7553% -97 - C8 -4H8E 10.6 ISPT_STAAN
89 HHSearch 79.7153% -98 - C8 -4U82 10.3 ISPT_STAAN
84 HHSearch 78.3644%-114 - C8 -5HXQ - ZFPS_SOLHA -
6 PsiBlast_PDB 78.2853% -99 - C8 -4H8E 10.6 ISPT_STAAN
7 PsiBlast_PDB 78.2453%-100 - C8 -4U82 10.3 ISPT_STAAN
90 HHSearch 78.0051%-111 - C8 -1F75 - UPPS_MICLU -
13 PsiBlast_PDB 78.0046%-109 - C8 -1X07 5.9 UPPS_ECOLI
54 PsiBlast_CBE 77.9946%-105 - C8 -1X08 7.5 UPPS_ECOLI
53 PsiBlast_CBE 77.8846%-104 - C8 -1X09 5.0 UPPS_ECOLI
11 PsiBlast_PDB 77.7746%-110 - C8 -1V7U 6.7 UPPS_ECOLI
83 HHSearch 77.5144%-119 - C8 -5HXP 2.6 ZFPS_SOLHA
68 PsiBlast_CBE 77.4744%-112 - C8 -5HXQ 3.8 ZFPS_SOLHA
92 HHSearch 77.4047%-106 - C8 -1X09 5.0 UPPS_ECOLI
66 PsiBlast_CBE 77.3344%-111 - C8 -5HXT 3.6 ZFPS_SOLHA
12 PsiBlast_PDB 76.8946%-102 - C8 -1X06 8.9 UPPS_ECOLI
69 PsiBlast_CBE 76.7044%-113 - C8 -5HXP 2.7 ZFPS_SOLHA
65 PsiBlast_CBE 76.6244%-111 - C8 -5HXT 4.4 ZFPS_SOLHA
15 PsiBlast_PDB 76.4446%-107 - C8 -2E99 5.6 UPPS_ECOLI
81 HHSearch 75.9541%-110 - C8 -2VG3 7.0 DPDS_MYCTU
43 PsiBlast_CBE 75.9246%-115 - C8 -3SGV 3.9 UPPS_ECOLI
37 PsiBlast_CBE 75.8046%-117 - C8 -3WYJ 8.5 UPPS_ECOLI
47 PsiBlast_CBE 75.6646%-119 - C8 -2E9A 3.9 UPPS_ECOLI
48 PsiBlast_CBE 75.5746%-121 - C8 -2E99 5.3 UPPS_ECOLI
14 PsiBlast_PDB 75.5046%-109 - C8 -2E98 6.1 UPPS_ECOLI
70 PsiBlast_CBE 75.4544%-117 - C8 -5HXP 2.6 ZFPS_SOLHA
16 PsiBlast_PDB 74.8546%-111 - C8 -2E9A 6.0 UPPS_ECOLI
49 PsiBlast_CBE 74.7846%-121 - C8 -2E98 5.8 UPPS_ECOLI
17 PsiBlast_PDB 74.6946%-110 - C8 -2E9C 2.7 UPPS_ECOLI
38 PsiBlast_CBE 73.8546%-113 - C8 -3TH8 5.2 UPPS_ECOLI
18 PsiBlast_PDB 73.4046%-111 - C8 -2E9D 4.6 UPPS_ECOLI
63 PsiBlast_CBE 68.8641% 1 - C8 -2VG2 4.2 DPDS_MYCTU
59 PsiBlast_CBE 68.7541% -1 - C8 -2VG3 7.8 DPDS_MYCTU
57 PsiBlast_CBE 68.5641% -2 - C8 -2VG3 7.3 DPDS_MYCTU
60 PsiBlast_CBE 68.2141% -0 - C8 -2VG3 7.4 DPDS_MYCTU
64 PsiBlast_CBE 67.9141% 1 - C8 -2VG2 3.0 DPDS_MYCTU
58 PsiBlast_CBE 67.8741% -1 - C8 -2VG3 7.0 DPDS_MYCTU
56 PsiBlast_CBE 67.8141% -3 - C8 -4ONC 7.3 DPDS_MYCTU
93 HHSearch 67.7237% -30 - C8 -5HC8 3.7 ?
61 PsiBlast_CBE 67.1841% 2 - C8 -2VG2 2.6 DPDS_MYCTU
72 PsiBlast_CBE 67.0037% -26 - C8 -5HC8 3.7 ?
55 PsiBlast_CBE 66.8841% -1 - C8 -4ONC 4.4 DPDS_MYCTU
62 PsiBlast_CBE 66.5941% 6 - C8 -2VG2 3.8 DPDS_MYCTU
73 PsiBlast_CBE 65.4137% -30 - C8 -5HC7 2.5 ?
71 PsiBlast_CBE 64.8237%-107 - C8 -2DTN 4.7 ISPT_HELPY