@TOME V2.3
(Mar 2018)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Modeled complexes Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor model: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : spr0244: (2017-12-18 )
MLRFPKDFVWGSSTSGPQTEGRVAGDGKGDNLWDYWFQVEPNRYYNGIGSDKTSTFYENWERDIELLLETGHTVFRTSIQWSRIFPQGCGKVNPQGVDFYRKVFEAIKAKGIRLLVNLYHFDLPFALQEDGDGWENKATVSAYEDYARFCFETYGDLVDQWITFNEPIVPVEFGYFYDAHYPHKVDAEAAVKVAYHTQLASSRAVKACHELLPDSKIGIVLNLTPAYPRSQHPADVKAARIAALFQAQSFLDPSVLGTYPQELVEILHEHGLLPDATEEELELIRDNTVDFLGVNYYQPLRVMAPRFAKHPESPLLPEHFYEPYVMPGRKINSHRGWEIYEQGIYDIAQNIKENYGNIEWMLTENGMGVEGEEKFRQDGMIQDDYRIDFVKGHLRELHRAIEDGANCKGYLIWTFIDCWSWLNSYKNRYGLVELDLETQERRLKKSGHWFKELSDNNGF

Atome Classification :

(22 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

TCB_A_3(4PTV)
?
[Raw transfer]




TCB_B_6(4PTV)
?
[Raw transfer]




GIM_A_4(2CES)
BGLA_THEMA
[Raw transfer]




NOY_B_6(2J75)
BGLA_THEMA
[Raw transfer]




NOJ_A_3(1OIM)
BGLA_THEMA
[Raw transfer]




NOY_A_4(2J75)
BGLA_THEMA
[Raw transfer]




BGC_A_2(4HZ7)
?
[Raw transfer]




IFL_A_3(1UZ1)
BGLA_THEMA
[Raw transfer]




CTS_B_6(2CBU)
BGLA_THEMA
[Raw transfer]




CTS_A_3(2CBU)
BGLA_THEMA
[Raw transfer]




CGB_A_3(2CBV)
BGLA_THEMA
[Raw transfer]




OXZ_A_3(1W3J)
BGLA_THEMA
[Raw transfer]




AZF_B_7(2J7H)
BGLA_THEMA
[Raw transfer]




BGC_B_5(4PTX)
?
[Raw transfer]




BGC_A_3(4PTX)
?
[Raw transfer]




IFM_A_3(3WH8)
?
[Raw transfer]




IFM_A_3(1OIF)
BGLA_THEMA
[Raw transfer]




FCB_A_2(3WH7)
?
[Raw transfer]




YLL_B_6(2JAL)
BGLA_THEMA
[Raw transfer]




G2F_A_3(4PTW)
?
[Raw transfer]




G2F_B_5(4PTW)
?
[Raw transfer]




3 PsiBlast_PDB 86.5247% 0 - C2 -5FOO - ? -
5 PsiBlast_PDB 86.3937% -75 - C2 -4PTV 3.9 ?
88 PsiBlast_CBE 86.1433% -83 - C2 -1TR1 - BGLA_PAEPO -
84 PsiBlast_CBE 85.9833% -85 - C2 -1UYQ - BGLA_PAEPO -
7 PsiBlast_PDB 85.9637% -76 - C2 -4PTX 3.6 ?
31 PsiBlast_CBE 85.8537% -75 - C2 -4PTV 3.6 ?
30 PsiBlast_CBE 85.6537% -74 - C2 -4PTW 2.8 ?
92 PsiBlast_CBE 85.5333% -85 - C2 -1BGG - BGLA_PAEPO -
25 PsiBlast_CBE 85.3647% -2 - C2 -5FOO - ? -
29 PsiBlast_CBE 85.3437% -75 - C2 -4PTX 3.4 ?
86 PsiBlast_CBE 85.2633% -83 - C2 -1TR1 - BGLA_PAEPO -
24 PsiBlast_CBE 84.9747% -2 - C2 -5FOO - ? -
89 PsiBlast_CBE 84.7833% -83 - C2 -1TR1 - BGLA_PAEPO -
87 PsiBlast_CBE 84.7533% -83 - C2 -1TR1 - BGLA_PAEPO -
6 PsiBlast_PDB 84.7437% -73 - C2 -4PTW 2.7 ?
85 PsiBlast_CBE 84.7133% -83 - C2 -1E4I - BGLA_PAEPO -
91 PsiBlast_CBE 84.5433% -85 - C2 -1BGG - BGLA_PAEPO -
90 PsiBlast_CBE 84.5133% -84 - C2 -1BGG - BGLA_PAEPO -
14 PsiBlast_PDB 84.0036% -53 - C2 -2CBU 4.6 BGLA_THEMA
20 PsiBlast_PDB 83.7836% -54 - C2 -2J75 4.3 BGLA_THEMA
13 PsiBlast_PDB 83.2736% -53 - C2 -1UZ1 3.8 BGLA_THEMA
74 PsiBlast_CBE 78.2734% -45 - C2 -4HZ7 3.7 ?