@TOME V2.3
(Mar 2018)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Modeled complexes Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor model: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : spr0269: (2017-12-18 )
MDQLQIKDLEMFAYHGLFPSEKELGQKFIVSAILSYDMTKAATDLDLTASVHYGELCQQWTTWFQETSEDLIETVAYKLVERTFESYPLVQEMKLELKKPWAPVHLSLDTCSVTIHRRKQRAFIALGSNMGDKQANLKQAIDKLRARGIHILKESSVLATEPWGGVEQDSFANQVVEVETWLPAQDLLETLLAIESELGRVREVHWGPRLIDLDLLFVEDQILYTDDLILPHPYIAERLFVLESLQEIAPHFIHPILKQPIRNLYDALKK

Atome Classification :

(25 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

PMM_A_3(2BMB)

[Raw transfer]



5RY_B_4(5ETT)
?
[Raw transfer]



5RY_A_10(5ETT)
?
[Raw transfer]



ROI_E_5(1CBK)
HPPK_HAEIN
[Raw transfer]



5RZ_A_3(5ETV)
?
[Raw transfer]



GSY_A_3(4AD6)
?
[Raw transfer]



5RW_B_4(5ETR)
?
[Raw transfer]



GSY_B_4(4AD6)
?
[Raw transfer]



ROI_F_6(1CBK)
HPPK_HAEIN
[Raw transfer]



5RW_A_11(5ETR)
?
[Raw transfer]



5RX_A_10(5ETS)
?
[Raw transfer]



B55_B_4(3QBC)
?
[Raw transfer]



B55_A_3(3QBC)
?
[Raw transfer]



PH2_A_9(2QX0)
?
[Raw transfer]



YH5_A_6(4CRJ)
?
[Raw transfer]



PH2_B_10(2QX0)
?
[Raw transfer]



5RX_B_4(5ETS)
?
[Raw transfer]



GOL_A_9(1RTZ)
HPPK_ECOLI
[Raw transfer]



APC_B_3(5ETR)
?
[Raw transfer]



APC_A_9(5ETS)
?
[Raw transfer]



EDO_A_3(3UD5)
HPPK_ECOLI
[Raw transfer]



TRS_A_4(3HSZ)
HPPK_ECOLI
[Raw transfer]
1 PsiBlast_PDB 90.12100%-136 - C4 -2CG8 - SULD_STRR6 -
95 HHSearch 89.69100%-128 - C4 -2CG8 - SULD_STRR6 -
100 HHSearch 54.6637% -47 - C5 -5ETR - ? -
2 PsiBlast_PDB 53.9737% -35 - C5 -5ETQ - ? -
21 PsiBlast_CBE 53.9637% -36 - C5 -5ETT 7.0 ?
9 PsiBlast_PDB 53.5437% -36 - C5 -5ETR 6.5 ?
23 PsiBlast_CBE 53.4437% -33 - C5 -5ETR 6.4 ?
103 HHSearch 53.2439% -55 - C5 -2BMB - -
22 PsiBlast_CBE 53.2137% -31 - C5 -5ETS 6.6 ?
11 PsiBlast_PDB 53.0937% -35 - C5 -5ETT 6.9 ?
10 PsiBlast_PDB 52.8137% -35 - C5 -5ETS 6.7 ?
5 PsiBlast_PDB 52.5137% -28 - C5 -3QBC 3.7 ?
12 PsiBlast_PDB 52.0140% -41 - C5 -2BMB 4.8
8 PsiBlast_PDB 51.8537% -27 - C5 -4CWB - ? -
99 HHSearch 51.5937% -36 - C5 -3QBC - ? -
3 PsiBlast_PDB 51.0037% -27 - C5 -5ETV 5.7 ?
84 PsiBlast_CBE 50.7133% -15 - C5 -3MCN - ? -
98 HHSearch 50.6834% -21 - C5 -1CBK - HPPK_HAEIN -
27 PsiBlast_CBE 50.6837% -26 - C5 -4AD6 4.1 ?
6 PsiBlast_PDB 50.6637% -24 - C5 -4AD6 3.7 ?
13 PsiBlast_PDB 50.1640% -35 - C5 -2QX0 4.3 ?
97 HHSearch 47.6535% -10 - C5 -2QX0 4.3 ?
72 PsiBlast_CBE 44.5037% -24 - C5 -3HSZ 3.4 HPPK_ECOLI
80 PsiBlast_CBE 43.9036% -26 - C5 -1RTZ 2.6 HPPK_ECOLI
43 PsiBlast_CBE 43.3838% -24 - C5 -3UD5 3.3 HPPK_ECOLI