@TOME V2.3
(Mar 2018)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Modeled complexes Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor model: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : spr0286: (2017-12-19 )
MILQYVYWSVYMQTKTKKLIVSLSSLVLSGFLLNHYMTVGAEETTTNTIQQSQKEVQYQQRDTKNLVENGDFGQTEDGSSPWTGSKAQGWSAWVDQKNSSADASTRVIEAKDGAITISSPEKLRAAVHRMVPIEAKKKYKLRFKIKTDNKVGIAKVRIIEESGKDKRLWNSATTSGTKDWQTIEADYSPTLDVDKIKLELFYETGTGTVSFKDIELVEVADQPSEDSQTDKQLEEKIDLPIGKKHVFSLADYTYKVENPDVASVKNGILEPLKEGTTNVIVSKDGKEVKKIPLKILASVKDTYTDRLDDWNGIIAGNQYYDSKNEQMAKLNQELEGKVADSLSSISSQADRIYLWEKFSNYKTSANLTATYRKLEEMAKQVTNPSSRYYQDETVVRTVRDSMEWMHKHVYNSEKSIVGNWWDYEIGTPRAINNTLSLMKEYFSDEEIKKYTDVIEKFVPDPEHFRKTTDNPFKALGGNLVDMGRVKVIAGLLRKDDQEISSTIRSIEQVFKLVDQGEGFYQDGSYIDHTNVAYTGAYGNVLIDGLSQLLPVIQKTKNPIDKDKMQTMYHWIDKSFAPLLVNGELMDMSRGRSISRANSEGHVAAVEVLRGIHRIADMSEGETKQRLQSLVKTIVQSDSYYDVFKNLKTYKDISLMQSLLSDAGVASVPRTSYLSAFNKMDKTAMYNAEKGFGFGLSLFSSRTLNYEHMNKENKRGWYTSDGMFYLYNGDLSHYSDGYWPTVNPYKMPGTTETDAKRADSDTGKVLPSAFVGTSKLDDANATATMDFTNWNQTLTAHKSWFMLKDKIAFLGSNIQNTSTDTAATTIDQRKLESSNPYKVYVNDKEASLTEQEKDYPETQSVFLESSDSKKNIGYFFFKKSSISMSKALQKGAWKDINEGQSDKEVENEFLTISQAHKQNGDSYGYMLIPNVDRATFNQMIKELESSLIENNETLQSVYDAKQGVWGIVKYDDSVSTISNQFQVLKRGVYTIRKEGDEYKIAYYNPETQESAPDQEVFKKLEQAAQPQVQNSKEKEKSEEEKNHSDQKNLPQTGEGQSILASLGFLLLGAFYLFRRGKNN

Atome Classification :

(22 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

PVC_A_2(1W3Y)
HYSA_STRPN
[Raw transfer]



SUGAR_A_2(1OJO)
HYSA_STRPN
[Raw transfer]
-
ASC_B_2(1F9G)
HYSA_STRPN
[Raw transfer]



SUGAR_B_2(1LXK)
HYSA_STRPN
[Raw transfer]
-
SUGAR_B_2(1N7Q)
HYSA_STRPN
[Raw transfer]
-
SUGAR_B_2(1LOH)
HYSA_STRPN
[Raw transfer]
-
SUGAR_B_2(1N7R)
HYSA_STRPN
[Raw transfer]
-
SUGAR_B_2(1N7R)
HYSA_STRPN
[Raw transfer]
-
MLA_X_2(2BRV)
HYSA_STRPN
[Raw transfer]



SIE_A_2(2BRP)
HYSA_STRPN
[Raw transfer]



GOL_A_2(2WCO)
?
[Raw transfer]



GOL_A_4(1CB8)
CSLA_PEDHD
[Raw transfer]



FMT_A_3(2WCO)
?
[Raw transfer]



SUGAR_A_2(1OJM)
HYSA_STRPN
[Raw transfer]
-
SUGAR_A_2(1OJP)
HYSA_STRPN
[Raw transfer]
-
SUGAR_A_2(1OJN)
HYSA_STRPN
[Raw transfer]
-
SUGAR_A_3(1C82)
HYSA_STRPN
[Raw transfer]
-
SUGAR_C_3(1I8Q)
HYSA_STRA3
[Raw transfer]
-
SUGAR_C_3(1I8Q)
HYSA_STRA3
[Raw transfer]
-
1 PsiBlast_PDB 97.1099% -36 - C1 -1F9G 2.1 HYSA_STRPN
24 HHSearch 96.82100% -34 - C1 -1N7O - HYSA_STRPN -
13 PsiBlast_PDB 96.6499% -34 - C1 -1N7O - HYSA_STRPN -
7 PsiBlast_PDB 96.5899% -34 - C1 -2BRW - HYSA_STRPN -
3 PsiBlast_PDB 96.5699% -33 - C1 -1OJP 4.8 HYSA_STRPN
5 PsiBlast_PDB 96.4699% -33 - C1 -2BRP 3.7 HYSA_STRPN
2 PsiBlast_PDB 96.4199% -34 - C1 -1C82 2.6 HYSA_STRPN
8 PsiBlast_PDB 96.2499% -34 - C1 -1OJN 5.4 HYSA_STRPN
4 PsiBlast_PDB 96.1899% -33 - C1 -1W3Y 4.3 HYSA_STRPN
10 PsiBlast_PDB 96.1499% -32 - C1 -1OJO 4.6 HYSA_STRPN
11 PsiBlast_PDB 96.0099% -34 - C1 -1LOH 6.7 HYSA_STRPN
14 PsiBlast_PDB 95.9099% -34 - C1 -1N7N - HYSA_STRPN -
16 PsiBlast_PDB 95.7999% -34 - C1 -1N7Q 5.7 HYSA_STRPN
9 PsiBlast_PDB 95.6899% -32 - C1 -1OJM 5.1 HYSA_STRPN
43 Fugue 95.5599% -31 - C1 -1EGU - HYSA_STRPN -
12 PsiBlast_PDB 95.3299% -32 - C1 -1LXK 9.5 HYSA_STRPN
17 PsiBlast_PDB 95.3199% -32 - C1 -1N7R 3.0 HYSA_STRPN
23 HHSearch 95.2699% -32 - C1 -1N7R 3.0 HYSA_STRPN
15 PsiBlast_PDB 94.8299% -33 - C1 -1N7P - HYSA_STRPN -
6 PsiBlast_PDB 93.6799% -34 - C1 -2BRV 3.3 HYSA_STRPN
21 HHSearch 69.3453% 47 - C1 -1I8Q 2.8 HYSA_STRA3
19 PsiBlast_PDB 68.8252% 47 - C1 -1I8Q 2.8 HYSA_STRA3