@TOME V2.3
(Mar 2018)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Modeled complexes Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor model: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : spr0322: (2017-12-20 )
MTEYKNIIVTGGAGFIGSNFVHYVYENFPDVHVTVLDKLTYAGNRANIEEILGNRVELVVGDIADAELVDKLAAQADAIVHYAAESHNDNSLNDPSPFIHTNFIGTYTLLEAARKYDIRFHHVSTDEVYGDLPLREDLPGHGEGPGEKFTAETKYNPSSPYSSTKAASDLIVKAWVRSFGVKATISNCSNNYGPYQHIEKFIPRQITNILSGIKPKLYGEGKNVRDWIHTNDHSSGVWTILTKGQIGETYLIGADGEKNNKEVLELILKEMGQAADAYDHVTDRAGHDLRYAIDASKLRDELGWKPEFTNFEAGLKATIKWYTDNQEWWKAEKEAVEANYAKTQEIITV

Atome Classification :

(29 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

NAD_F_6(1KEP)
RMLB_STRMU
[Raw transfer]



DAU_G_7(1KER)
?
[Raw transfer]



NAD_H_8(1KER)
?
[Raw transfer]



NAD_B_8(1OC2)
?
[Raw transfer]



DAU_F_6(1KER)
?
[Raw transfer]



NAD_B_8(1OC2)
?
[Raw transfer]



NAD_G_7(1KEP)
RMLB_STRMU
[Raw transfer]



NAD_E_5(1KET)
RMLB_STRMU
[Raw transfer]



NAD_I_9(1KER)
?
[Raw transfer]



NAD_F_6(1KET)
RMLB_STRMU
[Raw transfer]



NAD_I_9(1KER)
?
[Raw transfer]



NAD_E_5(1KEU)
RMLB_SALTY
[Raw transfer]



NAD_F_6(1KEU)
RMLB_SALTY
[Raw transfer]



NAD_F_6(1KEW)
RMLB_SALTY
[Raw transfer]



NAD_A_2(1R6D)
?
[Raw transfer]



NAD_A_2(1R6D)
?
[Raw transfer]



NAD_D_4(2HUN)
?
[Raw transfer]



NAD_A_4(1OC2)
?
[Raw transfer]



NAD_E_5(1KEU)
RMLB_SALTY
[Raw transfer]



NAD_D_4(2HUN)
?
[Raw transfer]



NAD_E_5(1KEW)
RMLB_SALTY
[Raw transfer]



NAD_E_5(1KEW)
RMLB_SALTY
[Raw transfer]



NAD_A_3(1R66)
?
[Raw transfer]



NAD_C_3(2HUN)
?
[Raw transfer]



NAD_C_3(2HUN)
?
[Raw transfer]



NAD_B_4(1BXK)
RMLB2_ECOLI
[Raw transfer]



NAD_A_3(1BXK)
RMLB2_ECOLI
[Raw transfer]
22 PsiBlast_CBE 99.2291% -52 - C1 -1KET 12.4 RMLB_STRMU
1 PsiBlast_PDB 98.8791% -52 - C1 -1KEP 12.6 RMLB_STRMU
24 PsiBlast_CBE 98.8191% -50 - C1 -1KEP 12.4 RMLB_STRMU
23 PsiBlast_CBE 98.0691% -51 - C1 -1KER 12.7 ?
2 PsiBlast_PDB 98.0591% -50 - C1 -1KER 12.6 ?
3 PsiBlast_PDB 97.9791% -54 - C1 -1KET 12.6 RMLB_STRMU
21 PsiBlast_CBE 97.6991% -49 - C1 -1OC2 12.4 ?
4 PsiBlast_PDB 96.8691% -49 - C1 -1OC2 12.1 ?
43 HHSearch 78.4691% 35 * C1 *1KER 12.7 ?
42 HHSearch 78.4291% 35 - C1 -1OC2 12.4 ?
7 PsiBlast_PDB 60.4845% -30 - C1 -1BXK 11.3 RMLB2_ECOLI
26 PsiBlast_CBE 58.4145% -26 - C1 -1BXK 11.8 RMLB2_ECOLI
30 PsiBlast_CBE 56.4844% 2 - C1 -1G1A - RMLB_SALTY -
8 PsiBlast_PDB 56.4344% 1 - C1 -1G1A - RMLB_SALTY -
31 PsiBlast_CBE 56.1444% 0 - C1 -1G1A - RMLB_SALTY -
29 PsiBlast_CBE 56.0544% 4 - C1 -1G1A - RMLB_SALTY -
5 PsiBlast_PDB 55.4448% -2 - C1 -2HUN 10.3 ?
28 PsiBlast_CBE 52.9744% 11 - C1 -1KEU 12.2 RMLB_SALTY
25 PsiBlast_CBE 52.7648% 3 - C1 -2HUN 10.8 ?
60 HHSearch 52.5446% 11 - C1 -1KEU 12.2 RMLB_SALTY
27 PsiBlast_CBE 52.5444% 11 - C1 -1KEW 12.5 RMLB_SALTY
59 HHSearch 52.2946% 12 - C1 -1KEW 12.7 RMLB_SALTY
9 PsiBlast_PDB 52.1844% 12 - C1 -1KEU 12.2 RMLB_SALTY
53 HHSearch 52.1546% 12 - C1 -1R6D 10.7 ?
50 HHSearch 51.9449% 10 - C1 -2HUN 10.3 ?
10 PsiBlast_PDB 51.8344% 12 - C1 -1KEW 12.6 RMLB_SALTY
12 PsiBlast_PDB 50.4142% 19 - C1 -1R6D 10.7 ?
11 PsiBlast_PDB 50.1243% 21 - C1 -1R66 10.7 ?
49 HHSearch 49.5049% 17 - C1 -2HUN 10.8 ?