@TOME V2.3
(Mar 2018)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Modeled complexes Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor model: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : spr0337: (2017-12-20 )
MKLLKKMMQVLLAVFFFGLLATNTVFANTTGGRFVDKDNRKYYVKDDHKAIYWHKIDGKTYYFGDIGEMVVGWQYLEIPGTGYRDNLFDNQPVNEIGLQEKWYYFGQDGALLEQTDKQVLEAKTSENTGKVYGEQYPLSAEKRTYYFDNNYAVKTGWIYEDGNWYYLNKLGNFGDDSYNPLPIGEVAKGWTQDFHVTIDIDRSKPAPWYYLDASGKMLTDWQKVNGKWYYFGSSGSMATGWKYVRGKWYYLDNKNGDMKTGWQYLGNKWYYLRSSGAMVTGWYQDGLTWYYLNAGNGDMKTGWFQVNGKWYYAYSSGALAVNTTVDGYSVNYNGEWVQ

Atome Classification :

(20 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

OIN_A_7(2X8O)
?
[Raw transfer]




OIN_A_7(2X8O)
?
[Raw transfer]




OIN_A_3(2X8P)
?
[Raw transfer]




BTB_A_7(2BIB)
?
[Raw transfer]




6 PsiBlast_PDB 95.66100% -80 - C3 -2X8P 3.3 ?
5 PsiBlast_PDB 94.54100% -78 - C3 -2X8O 4.0 ?
2 PsiBlast_PDB 94.44100% -74 - C3 -2V04 - ? -
4 PsiBlast_PDB 93.81100% -72 - C3 -2X8M - ? -
3 PsiBlast_PDB 91.96100% -76 - C3 -2V05 - ? -
1 PsiBlast_PDB 91.83100% -72 - C3 -2VYU - ? -
32 Fugue 90.5197% -71 - C3 -2V05 - ? -
42 HHSearch 81.0496% 23 - C3 -2X8O 4.0 ?
43 HHSearch 79.4696% 24 - C3 -2V05 - ? -
7 PsiBlast_PDB 55.0239% -83 - C3 -2BIB 2.3 ?
58 HHSearch 52.0245% -96 * C3 *2V05 - ? -
59 HHSearch 51.6945% -96 - C3 -2X8O - ? -
45 HHSearch 50.7240% -93 - C3 -2BIB - ? -
48 HHSearch 47.4727% 31 - C3 -4NP4 - TOXB_CLODI -
47 HHSearch 45.6925% 10 - C3 -4NP4 - TOXB_CLODI -
33 Fugue 43.6732% 21 - C3 -2BIB - ? -
52 HHSearch 43.2131% 82 - C3 -2BIB - ? -
14 PsiBlast_PDB 43.0644% -56 - C3 -2J8F - LYS_BPCP1 -
10 PsiBlast_PDB 42.9144% -64 - C3 -2IXU - LYS_BPCP1 -
44 HHSearch 42.3222% 15 - C3 -2QJ6 - TOXA_CLODI -