@TOME V2.3
(Mar 2018)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Modeled complexes Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor model: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : spr0380: (2017-12-21 )
MTKTAFLFAGQGAQYLGMGRDFYDQYPIVKETIDRASQVLGYDLRYLIDTEEDKLNQTRYTQPAILATSVAIYRLLQEKGYQPDMVAGLSLGEYSALVASGALDFEDAVALVAKRGAYMEEAAPADSGKMVAVLNTPVEVIEEACQKASELGVVTPANYNTPAQIVIAGEVVAVDRAVELLQEAGAKRLIPLKVSGPFHTSLLEPASQKLAETLAQVSFSDFTCPLVGNTEAAVMQKEDIAQLLTRQVKEPVRFYESIGVMQEAGISNFIEIGPGKVLSGFVKKIDQTAHLAHVEDQASLVALLEK

Atome Classification :

(29 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

GLY_A_2(3TQE)
?
[Raw transfer]



GOL_B_2(2G1H)
FABD_ECOLI
[Raw transfer]



GOL_B_2(2G1H)
FABD_ECOLI
[Raw transfer]



NHE_A_2(3R97)
?
[Raw transfer]



COZ_B_2(2G2Z)
FABD_ECOLI
[Raw transfer]



GOL_A_2(3K89)
?
[Raw transfer]



GOL_A_2(3K89)
?
[Raw transfer]



MLA_C_3(2G2Z)
FABD_ECOLI
[Raw transfer]



GOL_A_2(5DZ6)
PKSC_BACSU
[Raw transfer]



ACY_A_4(1NM2)
?
[Raw transfer]



ACY_A_4(1NM2)
?
[Raw transfer]



GOL_A_2(4AMN)
?
[Raw transfer]



CXS_A_14(3HJV)
?
[Raw transfer]



ACY_A_2(2QC3)
FABD_MYCTU
[Raw transfer]



GOL_A_4(5DZ7)
PKSE_BACSU
[Raw transfer]



ACY_A_2(4AMO)
?
[Raw transfer]



ACY_A_3(4AMO)
?
[Raw transfer]
1 PsiBlast_PDB 89.59100%-121 - C1 -3IM8 - ? -
40 HHSearch 72.1198% 1 - C1 -3IM8 - ? -
16 PsiBlast_PDB 62.4437% -84 - C1 -4RR5 - FABD_SYNY3 -
3 PsiBlast_PDB 58.8845% -13 - C1 -1MLA - FABD_ECOLI -
4 PsiBlast_PDB 58.3444% -11 - C1 -2G1H 3.1 FABD_ECOLI
45 HHSearch 58.2945% -10 - C1 -1MLA - FABD_ECOLI -
44 HHSearch 57.6445% -8 * C1 *2G1H 3.1 FABD_ECOLI
6 PsiBlast_PDB 57.5544% -11 - C1 -2G2Y - FABD_ECOLI -
5 PsiBlast_PDB 57.2444% -8 - C1 -2G2O - FABD_ECOLI -
2 PsiBlast_PDB 57.0847% - - C1 -3PTW - ? -
7 PsiBlast_PDB 56.8344% -14 - C1 -2G2Z 3.7 FABD_ECOLI
47 HHSearch 56.7041% -16 - C1 -3K89 3.0 ?
32 HHSearch 56.1148% - - C1 -3PTW - ? -
9 PsiBlast_PDB 55.9945% -11 - C1 -3HJV 2.6 ?
13 PsiBlast_PDB 55.2842% -5 - C1 -3H0P - FABD_SALTY -
19 PsiBlast_PDB 54.2236% -29 - C1 -3SBM - ? -
12 PsiBlast_PDB 53.9040% -2 - C1 -3IM9 - FABD_STAAM -
15 PsiBlast_PDB 53.8842% 1 - C1 -2CUY - ? -
11 PsiBlast_PDB 53.3643% -12 - C1 -3R97 2.9 ?
8 PsiBlast_PDB 53.3545% -30 - C- -3EZO - ? -
10 PsiBlast_PDB 52.6643% -7 - C1 -3K89 3.0 ?
22 PsiBlast_CBE 51.7935% -30 - C1 -5DZ7 2.2 PKSE_BACSU
14 PsiBlast_PDB 51.7541% -8 - C1 -3TQE 3.2 ?
20 PsiBlast_PDB 50.8234% -5 - C1 -5DZ6 2.7 PKSC_BACSU
27 PsiBlast_CBE 48.9033%-103 - C1 -4AMN 2.8 ?
29 PsiBlast_CBE 47.5233% -98 - C1 -4AMO 3.3 ?
55 Fugue 47.0931% -4 - C1 -1NM2 2.8 ?
30 PsiBlast_CBE 42.1831% -18 - C1 -2QC3 3.9 FABD_MYCTU
25 PsiBlast_CBE 40.9732% -4 - C1 -1NM2 2.8 ?