@TOME V2.3
(Mar 2018)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Modeled complexes Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor model: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : spr0385: (2017-12-21 )
MFRKILIANRGEIAVRIIRAARELGIATVAVYSTADKEALHTLLADEAVCIGPGKATESYLNINAVLSAAVLTEAEAIHPGFGFLSENSKFATMCEEVGIKFIGPSGHVMDMMGDKINARAQMIKAGVPVIPGSDGEVHNSEEALIVAEKIGYPVMLKASAGGGGKGIRKVEKPDDLVSAFETASSEAKANYGNGAMYIERVIYPARHIEVQILGDEHGHVIHLGERDCSLQRNNQKVLEESPSIAIGKTLRHEIGAAAVRAAEFVGYENAGTIEFLLDEASRNFYFMEMNTRVQVEHPVTEFVSGVDIVKEQICIAAGQPLSVKQEDIVLRGHAIECRINAENPAFNFAPSPGKITNLYLPSGGVGLRVDSAVYPGYTIPPYYDSMIAKIIVHGENRFDALMKMQRALYELEIEGVQTNADFQLDLISDRNVIAGDYDTSFLMETFLPKYQEKE

Atome Classification :

(28 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

ANP_A_7(3OUU)
?
[Raw transfer]




ANP_B_7(2VPQ)
?
[Raw transfer]




ATF_A_4(2VR1)
ACCC_ECOLI
[Raw transfer]




ANP_B_7(2VPQ)
?
[Raw transfer]




ADP_A_8(3OUZ)
?
[Raw transfer]




ANP_A_3(2VPQ)
?
[Raw transfer]




AP2_A_2(2VQD)
ACCC_PSEAE
[Raw transfer]




ATP_A_3(1DV2)
ACCC_ECOLI
[Raw transfer]




ATP_B_4(1DV2)
ACCC_ECOLI
[Raw transfer]




ACP_A_3(4MV8)
ACCC_HAEIN
[Raw transfer]




ACP_A_2(4MV4)
ACCC_HAEIN
[Raw transfer]




JZL_A_3(3JZI)
ACCC_ECOLI
[Raw transfer]




JZL_B_4(3JZI)
ACCC_ECOLI
[Raw transfer]




GOL_A_5(3VA7)
?
[Raw transfer]




GOL_A_5(3VA7)
?
[Raw transfer]




LZL_A_3(2V5A)
ACCC_ECOLI
[Raw transfer]




JZK_B_4(3JZF)
ACCC_ECOLI
[Raw transfer]




LZK_B_4(2V59)
ACCC_ECOLI
[Raw transfer]




LZK_A_3(2V59)
ACCC_ECOLI
[Raw transfer]




LZJ_B_5(2V58)
ACCC_ECOLI
[Raw transfer]




L23_A_4(2W71)
ACCC_ECOLI
[Raw transfer]




L23_C_6(2W71)
ACCC_ECOLI
[Raw transfer]




ADP_A_3(3RUP)
ACCC_ECOLI
[Raw transfer]




ADP_B_9(3RUP)
ACCC_ECOLI
[Raw transfer]




ADP_B_7(3RV3)
ACCC_ECOLI
[Raw transfer]




ADP_A_3(3RV3)
ACCC_ECOLI
[Raw transfer]




MOH_A_9(3RV4)
ACCC_ECOLI
[Raw transfer]




BTN_B_9(3G8C)
ACCC_ECOLI
[Raw transfer]




BTN_B_9(3G8C)
ACCC_ECOLI
[Raw transfer]




BTN_A_5(3G8C)
ACCC_ECOLI
[Raw transfer]




Y7Y_A_2(4RZQ)
ACCC_HAEIN
[Raw transfer]




1 PsiBlast_PDB 86.8256% -88 - C1 -2VPQ 6.9 ?
21 PsiBlast_CBE 86.3956% -89 - C1 -2VPQ 6.3 ?
119 HHSearch 86.2155% -91 - C1 -2VPQ 6.3 ?
121 HHSearch 85.3351% -90 - C1 -3OUZ 6.4 ?
120 HHSearch 83.5651% -88 - C1 -3OUU 6.8 ?
33 PsiBlast_CBE 82.8453% -34 - C1 -2W71 6.0 ACCC_ECOLI
32 PsiBlast_CBE 82.5453% -32 - C1 -2W71 6.1 ACCC_ECOLI
132 HHSearch 82.0754% -31 - C1 -3G8C 2.8 ACCC_ECOLI
49 PsiBlast_CBE 81.9853% -36 - C1 -3G8D - ACCC_ECOLI -
16 PsiBlast_PDB 81.9353% -32 - C1 -2W6M - ACCC_ECOLI -
11 PsiBlast_PDB 81.5953% -33 - C1 -2J9G - ACCC_ECOLI -
20 PsiBlast_PDB 81.3953% -35 - C1 -2W6Q - ACCC_ECOLI -
45 PsiBlast_CBE 81.3553% -36 - C1 -2V58 5.1 ACCC_ECOLI
51 PsiBlast_CBE 81.3353% -33 - C1 -3RV4 3.2 ACCC_ECOLI
23 PsiBlast_CBE 81.0553% -35 - C1 -3JZI 8.1 ACCC_ECOLI
15 PsiBlast_PDB 80.9753% -33 - C1 -2V5A 5.0 ACCC_ECOLI
12 PsiBlast_PDB 80.8853% -36 - C1 -2VR1 4.2 ACCC_ECOLI
25 PsiBlast_CBE 80.7453% -31 - C1 -3G8C 2.8 ACCC_ECOLI
18 PsiBlast_PDB 80.5953% -36 - C1 -2W6O - ACCC_ECOLI -
24 PsiBlast_CBE 80.3953% -30 - C1 -3JZF 8.3 ACCC_ECOLI
6 PsiBlast_PDB 80.3453% -35 - C1 -3G8C 2.6 ACCC_ECOLI
8 PsiBlast_PDB 80.0953% -34 - C1 -3RV3 5.8 ACCC_ECOLI
26 PsiBlast_CBE 79.7153% -32 - C1 -3RV3 6.1 ACCC_ECOLI
27 PsiBlast_CBE 79.5853% -36 - C1 -3RUP 6.6 ACCC_ECOLI
52 PsiBlast_CBE 78.9452%-100 - C1 -4RZQ 2.9 ACCC_HAEIN
7 PsiBlast_PDB 78.9453% -35 - C1 -3RUP 6.4 ACCC_ECOLI
104 PsiBlast_CBE 61.4644% -90 - C1 -3VA7 2.2 ?
139 Fugue 57.2740% 21 * C1 *3VA7 2.2 ?