@TOME V2.3
(Mar 2018)

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Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Modeled complexes Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor model: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : spr0401: (2017-12-21 )
MEKISLESPKTGSDLVLETLRDLGVDTIFGYPGGAVLPFYDAIYNFKGIRHILGRHEQGCLHEAEGYAKSTGKLGVAVVTSGPGATNAITGIADAMSDSVPLLVFTGQVARAGIGKDAFQEADIVGITMPITKYNYQVRETADIPRIITEAVHIATTGRPGPVVIDLPKDISALETDFIYSSEVNLPSYQPTLEPNDMQIKKILKQLSKAKKPVLLAGGGISYAEAATELNEFAERYQIPVVTSLLGQGTIATSHPLFLGMGGMHGSFAANIAMTEADFMISIGSRFDDRLTGNPKTFAKNAKVAHIDIDPAEIGKIISADIPVVGDAKKALQMLLAEPTVHNNTEKWIEKVTKDKNRVRSYDKKERVVQPQAVIERIGELTNGDAIVVTDVGQHQMWTAQYYPYQNERQLVTSDGLGTMGFGIPAAIGAKIANPDKEVVLFVGDGGFQMTNQELAILNIYKVPIKVVMLNNHSLGMVRQWQESFYEGRTSESVFDTLPDFQLMAQAYGIKNYKFDNPETLAQDLEVITEDVPMLIEVDISRKEQVLPMVPAGKSNHEMLGVQFHA

Atome Classification :

(26 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

60G_B_10(5FEM)
ILVB_YEAST
[Raw transfer]




FAD_B_12(1T9B)
ILVB_YEAST
[Raw transfer]




FAD_B_8(5FEM)
ILVB_YEAST
[Raw transfer]




FAD_A_10(1T9A)
ILVB_YEAST
[Raw transfer]




6QL_A_4(5K3S)
ILVB_ARATH
[Raw transfer]




FAD_B_14(1T9A)
ILVB_YEAST
[Raw transfer]




FAD_A_4(5FEM)
ILVB_YEAST
[Raw transfer]




FAD_B_14(1N0H)
ILVB_YEAST
[Raw transfer]




FAD_A_9(1T9C)
ILVB_YEAST
[Raw transfer]




60G_A_5(5FEM)
ILVB_YEAST
[Raw transfer]




FAD_A_3(5K6T)
ILVB_ARATH
[Raw transfer]




FAD_A_3(5K2O)
ILVB_ARATH
[Raw transfer]




FAD_A_3(5K6R)
ILVB_ARATH
[Raw transfer]




FAD_B_11(1T9C)
ILVB_YEAST
[Raw transfer]




FAD_A_3(5K3S)
ILVB_ARATH
[Raw transfer]




FAD_A_10(1N0H)
ILVB_YEAST
[Raw transfer]




1TB_B_11(1T9A)
ILVB_YEAST
[Raw transfer]




1TB_A_7(1T9A)
ILVB_YEAST
[Raw transfer]




1CS_B_11(1T9B)
ILVB_YEAST
[Raw transfer]




1SM_A_7(1T9C)
ILVB_YEAST
[Raw transfer]




1SM_B_10(1T9C)
ILVB_YEAST
[Raw transfer]




6R4_A_4(5K6T)
ILVB_ARATH
[Raw transfer]




FAD_A_3(5K6Q)
?
[Raw transfer]




6QK_A_4(5K2O)
ILVB_ARATH
[Raw transfer]




CIE_B_11(1N0H)
ILVB_YEAST
[Raw transfer]




AYD_A_9(1N0H)
ILVB_YEAST
[Raw transfer]




CIE_A_7(1N0H)
ILVB_YEAST
[Raw transfer]




P22_A_13(1T9B)
ILVB_YEAST
[Raw transfer]




6R5_A_4(5K6R)
ILVB_ARATH
[Raw transfer]




TPP_A_7(5FEM)
ILVB_YEAST
[Raw transfer]




TPP_B_6(5AHK)
?
[Raw transfer]




TPP_A_10(1JSC)
ILVB_YEAST
[Raw transfer]




TPP_B_14(5IMS)
ILVB_YEAST
[Raw transfer]




TPP_B_14(5INU)
ILVB_YEAST
[Raw transfer]




HTL_B_13(5INV)
ILVB_YEAST
[Raw transfer]




TPP_A_6(5INU)
ILVB_YEAST
[Raw transfer]




4 PsiBlast_PDB 94.3942% -25 - C6 -5K6T 12.1 ILVB_ARATH
1 PsiBlast_PDB 93.7642% -24 - C6 -5K2O 11.5 ILVB_ARATH
2 PsiBlast_PDB 93.7542% -23 - C6 -5K3S 11.7 ILVB_ARATH
3 PsiBlast_PDB 93.6142% -22 - C6 -5K6R 12.0 ILVB_ARATH
5 PsiBlast_PDB 93.0442% -24 - C6 -5K6Q 11.1 ?
27 PsiBlast_CBE 90.4542% -24 - C6 -1T9D - ILVB_YEAST -
46 HHSearch 90.3835% -32 - C6 -2PAN - GCL_ECOLI -
9 PsiBlast_PDB 90.0842% -23 - C6 -1T9B 5.0 ILVB_YEAST
29 PsiBlast_CBE 89.8742% -14 - C6 -1T9B 10.7 ILVB_YEAST
26 PsiBlast_CBE 89.7942% -25 - C6 -1T9D - ILVB_YEAST -
28 PsiBlast_CBE 89.6142% -16 - C6 -1T9C 12.8 ILVB_YEAST
31 PsiBlast_CBE 89.5942% -13 - C6 -1N0H 12.2 ILVB_YEAST
30 PsiBlast_CBE 89.5742% -15 - C6 -1T9A 12.6 ILVB_YEAST
8 PsiBlast_PDB 89.4942% -12 - C6 -1T9A 12.5 ILVB_YEAST
12 PsiBlast_PDB 89.4242% -11 - C6 -5FEM 12.9 ILVB_YEAST
7 PsiBlast_PDB 89.0942% -15 - C6 -1N0H 12.3 ILVB_YEAST
24 PsiBlast_CBE 89.0242% -13 - C6 -5FEM 12.9 ILVB_YEAST
10 PsiBlast_PDB 88.9042% -14 - C6 -1T9C 12.7 ILVB_YEAST
11 PsiBlast_PDB 88.5342% -14 - C6 -1T9D - ILVB_YEAST -
25 PsiBlast_CBE 88.1342% -14 - C6 -1T9D - ILVB_YEAST -
44 HHSearch 87.6043% -9 * C6 *5FEM 8.0 ILVB_YEAST
23 PsiBlast_CBE 86.8142% -17 - C6 -5IMS 6.7 ILVB_YEAST
22 PsiBlast_CBE 86.0942% -18 - C6 -5INU 6.6 ILVB_YEAST
6 PsiBlast_PDB 85.7342% -13 - C6 -1JSC 5.6 ILVB_YEAST
21 PsiBlast_CBE 85.6742% -17 - C6 -5INV 6.7 ILVB_YEAST
43 HHSearch 84.8643% -14 - C6 -5INU 6.4 ILVB_YEAST