@TOME V2.3
(Mar 2018)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Modeled complexes Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor model: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : spr0403: (2017-12-21 )
MTVQMEYEKDVKVAALDGKKIAVIGYGSQGHAHAQNLRDSGRDVIIGVRPGKSFDKAKEDGFDTYTVAEATKLADVIMILAPDEIQQELYEAEIAPNLEAGNAVGFAHGFNIHFEFIKVPADVDVFMCAPKGPGHLVRRTYEEGFGVPALYAVYQDATGNAKNIAMDWCKGVGAARVGLLETTYKEETEEDLFGEQAVLCGGLTALIEAGFEVLTEAGYAPELAYFEVLHEMKLIVDLIYEGGFKKMRQSISNTAEYGDYVSGPRVITEQVKENMKAVLADIQNGKFANDFVNDYKAGRPKLTAYREQAANLEIEKVGAELRKAMPFVGKNDDDAFKIYN

Atome Classification :

(26 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

NDP_B_11(4XDZ)
ILVC_IGNAA
[Raw transfer]



NAP_B_9(4KQW)
ILVC_SLAES
[Raw transfer]



NAP_B_9(4KQW)
ILVC_SLAES
[Raw transfer]



NDP_A_6(4TSK)
ILVC_ALIAD
[Raw transfer]



NAD_B_10(4KQX)
ILVC_SLAES
[Raw transfer]



NDP_A_6(4TSK)
ILVC_ALIAD
[Raw transfer]



NAD_B_10(4KQX)
ILVC_SLAES
[Raw transfer]



NAP_A_3(4KQW)
ILVC_SLAES
[Raw transfer]



NAD_A_3(4KQX)
ILVC_SLAES
[Raw transfer]



NAI_B_12(4XDY)
ILVC_UNCAG
[Raw transfer]



NAI_A_5(4XDY)
ILVC_UNCAG
[Raw transfer]



HIO_B_9(4KQX)
ILVC_SLAES
[Raw transfer]



HIO_A_8(4XDY)
ILVC_UNCAG
[Raw transfer]



HIO_A_8(4XDY)
ILVC_UNCAG
[Raw transfer]



HIO_B_9(4XDY)
ILVC_UNCAG
[Raw transfer]



HIO_A_4(4KQX)
ILVC_SLAES
[Raw transfer]



40E_B_14(4XDZ)
ILVC_IGNAA
[Raw transfer]



40E_B_14(4XDZ)
ILVC_IGNAA
[Raw transfer]



PEG_B_10(3FR8)
ILV5_ORYSJ
[Raw transfer]



PEG_B_10(3FR8)
ILV5_ORYSJ
[Raw transfer]



PE4_A_6(3FR8)
ILV5_ORYSJ
[Raw transfer]
1 PsiBlast_PDB 89.9862%-114 - C3 -4TSK 11.1 ILVC_ALIAD
113 HHSearch 82.1760% -49 - C3 -4TSK 11.1 ILVC_ALIAD
7 PsiBlast_PDB 81.1647% 0 - C- -5E4R - ILVC_IGNAA -
4 PsiBlast_PDB 81.1454% -43 - C3 -1NP3 - ILVC_PSEAE -
106 HHSearch 81.1054% -42 - C3 -1NP3 - ILVC_PSEAE -
126 Fugue 80.8753% -43 - C3 -1NP3 - ILVC_PSEAE -
112 HHSearch 80.8154% -40 - C3 -4XIY - ILVC_AZOVD -
23 PsiBlast_CBE 80.7554% -42 - C3 -4XIY - ILVC_AZOVD -
116 HHSearch 80.0156% -36 - C3 -4KQX 9.2 ILVC_SLAES
24 PsiBlast_CBE 79.8554% -38 - C3 -4XIY - ILVC_AZOVD -
2 PsiBlast_PDB 79.8256% -41 - C3 -4KQW 6.0 ILVC_SLAES
21 PsiBlast_CBE 79.7656% -40 - C3 -4KQW 9.3 ILVC_SLAES
22 PsiBlast_CBE 79.6555% -37 - C3 -4KQX 7.9 ILVC_SLAES
25 PsiBlast_CBE 79.4354% -38 - C3 -4XIY - ILVC_AZOVD -
114 HHSearch 79.1156% -39 - C3 -4KQW 7.1 ILVC_SLAES
3 PsiBlast_PDB 78.9455% -40 - C3 -4KQX 8.8 ILVC_SLAES
28 PsiBlast_CBE 75.5047% -45 - C3 -4XDZ 11.3 ILVC_IGNAA
110 HHSearch 75.4345% -42 - C3 -4XDZ 3.5 ILVC_IGNAA
8 PsiBlast_PDB 75.3147% -47 - C3 -4XDZ - ILVC_IGNAA -
5 PsiBlast_PDB 75.2952% -26 - C3 -4YPO - ILVC_MYCTU -
111 HHSearch 68.9250% 21 - C3 -4XDY 3.5 ILVC_UNCAG
6 PsiBlast_PDB 68.1650% 23 - C3 -4XDY 8.0 ILVC_UNCAG
27 PsiBlast_CBE 68.0050% 21 - C3 -4XDY 8.0 ILVC_UNCAG
108 HHSearch 52.8630% 35 - C3 -3FR8 3.0 ILV5_ORYSJ
13 PsiBlast_PDB 42.7635% 27 - C3 -3FR8 2.7 ILV5_ORYSJ
31 PsiBlast_CBE 42.5835% 29 - C3 -3FR8 3.0 ILV5_ORYSJ