@TOME V2.3
(Mar 2018)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Modeled complexes Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor model: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : spr0441: (2017-12-22 )
MAKLTVKDVDLKGKKVLVRVDFNVPLKDGVITNDNRITAALPTIKYIIEQGGRAILFSHLGRVKEESDKAGKSLAPVAADLAAKLGQDVVFPGVTRGAELEAAINALEDGQVLLVENTRYEDVDGKKESKNDPELGKYWASLGDGIFVNDAFGTAHRAHASNVGISANVEKAVAGFLLENEIAYIQEAVETPERPFVAILGGSKVSDKIGVIENLLEKADKVLIGGGMTYTFYKAQGIEIGNSLVEEDKLDVAKALLEKANGKLILPVDSKEANAFAGYTEVRDTEGEAVSEGFLGLDIGPKSIAKFDEALTGAKTVVWNGPMGVFENPDFQAGTIGVMDAIVKQPGVKSIIGGGDSAAAAINLGRADKFSWISTGGGASMELLEGKVLPGLAALTEK

Atome Classification :

(61 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

ATP_A_3(1VJD)
PGK1_PIG
[Raw transfer]



ADP_A_3(2X15)
PGK1_HUMAN
[Raw transfer]



ADP_A_4(2WZB)
PGK1_HUMAN
[Raw transfer]



ADP_A_5(2WZC)
PGK1_HUMAN
[Raw transfer]



ADP_A_4(2X13)
PGK1_HUMAN
[Raw transfer]



ADP_A_4(2WZB)
PGK1_HUMAN
[Raw transfer]



ADP_A_5(2WZD)
PGK1_HUMAN
[Raw transfer]



ANP_A_3(1VPE)
PGKT_THEMA
[Raw transfer]



ANP_A_3(1VPE)
PGKT_THEMA
[Raw transfer]



ADP_A_3(2XE7)
PGK1_HUMAN
[Raw transfer]



ADP_A_4(4AXX)
PGK1_HUMAN
[Raw transfer]



ADP_A_6(3ZOZ)
PGK1_HUMAN
[Raw transfer]



ACP_A_4(2X14)
PGK1_HUMAN
[Raw transfer]



ANP_A_4(3ZLB)
PGK_STRP2
[Raw transfer]



ADP_A_3(1PHP)
PGK_GEOSE
[Raw transfer]



ADP_A_3(1PHP)
PGK_GEOSE
[Raw transfer]



MAP_A_2(1QPG)
PGK_YEAST
[Raw transfer]



ATP_A_3(2PAA)
PGK2_MOUSE
[Raw transfer]



MAP_A_2(1QPG)
PGK_YEAST
[Raw transfer]



LA8_A_4(2YBE)
PGK1_HUMAN
[Raw transfer]



LA8_D_8(2Y3I)
PGK1_HUMAN
[Raw transfer]



BIS_A_2(16PK)
PGKC_TRYBB
[Raw transfer]



LA8_A_5(2Y3I)
PGK1_HUMAN
[Raw transfer]



BIS_A_2(16PK)
PGKC_TRYBB
[Raw transfer]



ATP_A_3(1VJC)
PGK1_PIG
[Raw transfer]



ATP_A_3(1VJC)
PGK1_PIG
[Raw transfer]



ACP_A_4(1KF0)
PGK1_PIG
[Raw transfer]



ADP_A_2(2ZGV)
PGK1_HUMAN
[Raw transfer]



ADP_A_2(4FEY)
PGK_FRATT
[Raw transfer]



GOL_A_7(3ZLB)
PGK_STRP2
[Raw transfer]



ADP_A_2(4FEY)
PGK_FRATT
[Raw transfer]



ACP_A_3(2XE8)
PGK1_HUMAN
[Raw transfer]



AMP_A_2(1HDI)
PGK1_PIG
[Raw transfer]



CDP_A_5(3C3C)
PGK1_HUMAN
[Raw transfer]



ADP_B_6(3C3A)
PGK1_HUMAN
[Raw transfer]



FMT_A_5(3Q3V)
PGK_CAMJE
[Raw transfer]



FMT_B_11(3Q3V)
PGK_CAMJE
[Raw transfer]



ATP_A_3(3PGK)
PGK_YEAST
[Raw transfer]



ATP_A_3(3PGK)
PGK_YEAST
[Raw transfer]



GOL_E_5(1FW8)
PGK_YEAST
[Raw transfer]



CDF_B_5(3C3B)
PGK1_HUMAN
[Raw transfer]



3PG_A_5(2WZB)
PGK1_HUMAN
[Raw transfer]



3PG_A_4(1VPE)
PGKT_THEMA
[Raw transfer]



3PG_A_3(3C39)
PGK1_HUMAN
[Raw transfer]



3PG_B_4(3C39)
PGK1_HUMAN
[Raw transfer]



3PG_A_2(2P9T)
PGK2_MOUSE
[Raw transfer]



3PG_A_2(2XE6)
PGK1_HUMAN
[Raw transfer]



3PG_B_6(3C3C)
PGK1_HUMAN
[Raw transfer]



3PG_A_5(2CUN)
PGK_PYRHO
[Raw transfer]



3PG_B_6(2CUN)
PGK_PYRHO
[Raw transfer]



3PG_A_4(3C3A)
PGK1_HUMAN
[Raw transfer]



3PG_B_4(2PAA)
PGK2_MOUSE
[Raw transfer]



TZN_A_2(4O3F)
PGK1_MOUSE
[Raw transfer]



TZN_A_2(4O33)
PGK1_HUMAN
[Raw transfer]
1 PsiBlast_PDB 99.22100% -75 - C6 -3ZLB 3.8 PGK_STRP2
58 HHSearch 83.7799% 19 - C6 -3ZLB 7.8 PGK_STRP2
62 HHSearch 79.2657% -46 - C6 -1VPE 8.5 PGKT_THEMA
57 HHSearch 78.9151% -52 * C6 *1PHP 7.7 PGK_GEOSE
3 PsiBlast_PDB 78.6356% -47 - C6 -1VPE 8.5 PGKT_THEMA
5 PsiBlast_PDB 78.0448% -50 - C6 -1V6S - PGK_THET8 -
21 PsiBlast_CBE 76.8248% -48 - C6 -1V6S - PGK_THET8 -
6 PsiBlast_PDB 76.1048% -47 - C6 -2IE8 - ? -
50 PsiBlast_CBE 70.8243% -30 - C6 -4NG4 - PGK_COXBU -
59 HHSearch 70.4046% 10 - C6 -3Q3V 3.2 PGK_CAMJE
75 HHSearch 70.1845% -22 - C6 -4NG4 - PGK_COXBU -
60 HHSearch 69.9746% 6 - C6 -3Q3V 3.3 PGK_CAMJE
71 HHSearch 69.8944% -17 - C6 -1ZMR - PGK_ECOLI -
49 PsiBlast_CBE 69.7143% -29 - C6 -4NG4 - PGK_COXBU -
52 PsiBlast_CBE 69.2645% -21 - C6 -4FEY 5.6 PGK_FRATT
38 PsiBlast_CBE 68.9446% 12 - C6 -2XE6 5.6 PGK1_HUMAN
74 HHSearch 68.7445% -21 - C6 -4NG4 - PGK_COXBU -
48 PsiBlast_CBE 68.6845% 7 - C6 -1HDI 5.5 PGK1_PIG
51 PsiBlast_CBE 68.4643% -25 - C6 -4NG4 - PGK_COXBU -
44 PsiBlast_CBE 68.3846% -1 - C6 -2X14 8.5 PGK1_HUMAN
42 PsiBlast_CBE 68.1846% 13 - C6 -4O33 5.1 PGK1_HUMAN
56 PsiBlast_CBE 68.1235% -29 - C6 -2CUN 2.5 PGK_PYRHO
47 PsiBlast_CBE 68.1146% 9 - C6 -4O3F 6.5 PGK1_MOUSE
55 PsiBlast_CBE 68.0135% -26 - C6 -2CUN 2.8 PGK_PYRHO
19 PsiBlast_PDB 67.7646% 6 - C6 -3C3C 4.4 PGK1_HUMAN
37 PsiBlast_CBE 67.5146% 13 - C6 -2XE7 6.4 PGK1_HUMAN
32 PsiBlast_CBE 67.4246% -2 - C6 -2WZC 8.1 PGK1_HUMAN
7 PsiBlast_PDB 67.3548% 13 - C6 -1QPG 8.1 PGK_YEAST
20 PsiBlast_PDB 67.2946% -1 - C6 -2WZB 8.4 PGK1_HUMAN
36 PsiBlast_CBE 67.1946% 14 - C6 -2XE8 5.1 PGK1_HUMAN
41 PsiBlast_CBE 67.0345% 18 - C6 -2P9T 4.9 PGK2_MOUSE
63 HHSearch 66.9646% -12 - C6 -4FEY 5.6 PGK_FRATT
69 HHSearch 66.8850% 9 - C6 -1QPG 8.1 PGK_YEAST
11 PsiBlast_PDB 66.7946% 10 - C6 -1KF0 5.8 PGK1_PIG
34 PsiBlast_CBE 66.7146% 6 - C6 -3ZOZ 8.0 PGK1_HUMAN
25 PsiBlast_CBE 66.6746% 14 - C6 -2Y3I 6.7 PGK1_HUMAN
16 PsiBlast_PDB 66.6646% 6 - C6 -3C39 5.3 PGK1_HUMAN
35 PsiBlast_CBE 66.6146% 15 - C6 -2YBE 7.7 PGK1_HUMAN
43 PsiBlast_CBE 66.5746% -1 - C6 -2WZD 7.1 PGK1_HUMAN
13 PsiBlast_PDB 66.5046% 11 - C6 -1VJD 6.0 PGK1_PIG
31 PsiBlast_CBE 66.4046% 13 - C6 -2X13 7.3 PGK1_HUMAN
15 PsiBlast_PDB 66.2146% 15 - C6 -2ZGV 5.4 PGK1_HUMAN
30 PsiBlast_CBE 66.0446% 10 - C6 -2X15 8.0 PGK1_HUMAN
40 PsiBlast_CBE 65.9845% 22 - C6 -2PAA 5.9 PGK2_MOUSE
27 PsiBlast_CBE 65.9646% 8 - C6 -3C3B 4.2 PGK1_HUMAN
28 PsiBlast_CBE 65.9246% 5 - C6 -3C3A 5.5 PGK1_HUMAN
14 PsiBlast_PDB 65.8346% 14 - C6 -2Y3I 6.5 PGK1_HUMAN
29 PsiBlast_CBE 65.7046% 10 - C6 -3C39 5.6 PGK1_HUMAN
33 PsiBlast_CBE 65.6046% 11 - C6 -4AXX 7.9 PGK1_HUMAN
12 PsiBlast_PDB 65.5046% 15 - C6 -1VJC 6.0 PGK1_PIG
66 HHSearch 65.3347% 23 - C6 -1VJC 6.0 PGK1_PIG
26 PsiBlast_CBE 65.3246% 6 - C6 -3C3C 4.7 PGK1_HUMAN
17 PsiBlast_PDB 65.2146% 11 - C6 -3C3A 4.0 PGK1_HUMAN
70 HHSearch 65.1647% 13 - C6 -16PK 7.1 PGKC_TRYBB
9 PsiBlast_PDB 65.0144% 14 - C6 -16PK 7.1 PGKC_TRYBB
67 HHSearch 64.9047% 23 - C6 -2WZB 8.4 PGK1_HUMAN
4 PsiBlast_PDB 63.3849% 28 - C6 -1PHP 7.7 PGK_GEOSE
39 PsiBlast_CBE 63.2145% 18 - C6 -2PAA 3.7 PGK2_MOUSE
68 HHSearch 61.8849% -9 - C6 -3PGK 2.9 PGK_YEAST
10 PsiBlast_PDB 60.3847% -7 - C6 -3PGK 2.9 PGK_YEAST
53 PsiBlast_CBE 54.5547% 22 - C6 -1FW8 2.7 PGK_YEAST