@TOME V2.3
(Mar 2018)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Modeled complexes Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor model: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : spr0458: (2017-12-22 )
MSDCIFCKIIAGEIPASKVYEDEQVLAFLDISQVTLGHTLVVPKEHYRNLLEMDATSASQLFAQVPKVAQKVMKVTKAAGMNIISNCEEVAGQTVFHTHVHLVPRYSADDDLKIDFIAHEPDFDKLAQVAETIKNA

Atome Classification :

(28 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

5GP_B_6(4EGU)
?
[Raw transfer]



5GP_A_3(4EGU)
?
[Raw transfer]



AMP_A_3(3OMF)
HIT_ENTHI
[Raw transfer]



ADN_A_2(3O1C)
HINT1_RABIT
[Raw transfer]



UNL_B_6(3LB5)
?
[Raw transfer]



UNL_D_8(3LB5)
?
[Raw transfer]



EDO_B_10(3P0T)
?
[Raw transfer]



UNL_A_5(3LB5)
?
[Raw transfer]



EDO_A_6(3P0T)
?
[Raw transfer]



UNL_C_7(3LB5)
?
[Raw transfer]



UNL_C_7(3LB5)
?
[Raw transfer]



EDO_A_7(3P0T)
?
[Raw transfer]



EDO_B_12(3P0T)
?
[Raw transfer]
1 PsiBlast_PDB 90.1365%-150 - C3 -3L7X - ? -
108 HHSearch 89.7564%-146 - C3 -3L7X - ? -
2 PsiBlast_PDB 81.1948%-171 - C3 -3IMI - ? -
109 HHSearch 79.8049%-167 - C3 -3IMI - ? -
3 PsiBlast_PDB 78.3948%-143 - C3 -1Y23 - HIT_BACSU -
4 PsiBlast_PDB 73.1342%-170 - C3 -2EO4 - ? -
8 PsiBlast_PDB 72.7342%-186 - C3 -5UVM - ? -
91 PsiBlast_CBE 72.5034%-183 - C3 -3N1S - HINT_ECOLI -
96 PsiBlast_CBE 72.3634%-178 - C3 -3N1S - HINT_ECOLI -
97 PsiBlast_CBE 72.2734%-181 - C3 -3N1S - HINT_ECOLI -
106 PsiBlast_CBE 71.1733%-177 - C3 -3N1T - HINT_ECOLI -
7 PsiBlast_PDB 71.1435%-141 - C3 -3KSV - ? -
107 HHSearch 71.0435%-141 - C3 -3KSV - ? -
104 PsiBlast_CBE 70.9433%-180 - C3 -3N1T - HINT_ECOLI -
112 HHSearch 70.7836%-116 - C3 -3LB5 2.8 ?
92 PsiBlast_CBE 70.6434%-169 - C3 -3N1S - HINT_ECOLI -
113 HHSearch 70.0436%-143 - C3 -3LB5 3.0 ?
103 PsiBlast_CBE 69.8333%-177 - C3 -3N1T - HINT_ECOLI -
10 PsiBlast_PDB 69.5941%-193 - C3 -3OJ7 - HIT_ENTHI -
105 PsiBlast_CBE 69.4133%-182 - C3 -3N1T - HINT_ECOLI -
30 PsiBlast_CBE 69.1643%-106 - C3 -4EGU 7.0 ?
31 PsiBlast_CBE 67.9137%-168 - C3 -3P0T 3.3 ?
13 PsiBlast_PDB 67.4937%-167 - C3 -3P0T 3.5 ?
9 PsiBlast_PDB 66.9643% -94 - C3 -4EGU 7.0 ?
5 PsiBlast_PDB 66.1542%-155 - C3 -3LB5 2.6 ?
26 PsiBlast_CBE 64.3442%-137 - C3 -3LB5 2.8 ?
27 PsiBlast_CBE 62.4542%-152 - C3 -3LB5 2.8 ?
126 HHSearch 62.0132%-136 - C3 -3O1C 4.6 HINT1_RABIT