@TOME V2.3
(Mar 2018)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Modeled complexes Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor model: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : spr0506: (2017-12-23 )
MTIFPDDFLWGGAVAANQVEGAYNEDGKGLSVQDVLPKGGLGEATENPTEDNLKLIGIDFYHKYKEDISLFSEMGFNVFRTSIAWSRIFPKGDEEEPNEAGLKYYDELFDELHAHGIEPLVTLSHYETPLYLARKYHGWIDRRMIHFYEKFARTVLERYKDKVKYWLTFNEVNSVLELPFTSGGIDIPKENLSKQELYQAIHHELVASSLVTKIAREINSEFKVGCMVLAMPAYPMTPNPKDVWATHEYENLNYLFSDVHVRGYYPNYAKRYFKEHDINIEFAAEDAELLKNYTVDFLSFSYYMSVTQSALPTQYNSGEGNIIGGLVNPYLESSEWGWQIDPIGLRIILNRYYDRYQIPLFIVENGLGAKDQLIKDEFNNLTVQDDYRIQYMKEHLLQVAEALQDGVEIMGYTSWGCIDCVSMSTAQLSKRYGLIYVDRNDDGNGTFNRYKKMSFTWYKGVIESNGESLFK

Atome Classification :

(25 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

1FT_B_3(4IPN)
?
[Raw transfer]



BG6_A_3(4F66)
?
[Raw transfer]



BG6_B_7(4F66)
?
[Raw transfer]



6GB_A_3(4GPN)
?
[Raw transfer]



P53_A_2(4F79)
?
[Raw transfer]



6GB_B_5(4GPN)
?
[Raw transfer]



1FT_E_4(4IPN)
?
[Raw transfer]



1FT_E_4(4IPN)
?
[Raw transfer]



GOL_A_3(4IPL)
?
[Raw transfer]



BGP_B_4(4PBG)
LACG_LACLL
[Raw transfer]



BGP_A_3(4PBG)
LACG_LACLL
[Raw transfer]



GOL_A_10(4ZEN)
?
[Raw transfer]
74 HHSearch 92.6799% -90 - C1 -4IPL - ? -
73 HHSearch 92.2999% -90 - C1 -4IPN 2.7 ?
1 PsiBlast_PDB 92.1298% -90 - C1 -4IPL 2.8 ?
21 PsiBlast_CBE 92.0998% -90 - C1 -4IPN 2.7 ?
2 PsiBlast_PDB 91.2198% -94 - C1 -4IPN 4.8 ?
85 HHSearch 70.0940% -33 - C1 -4ZEH - ? -
29 PsiBlast_CBE 69.6738% -46 - C1 -4ZEH - ? -
11 PsiBlast_PDB 69.6338% -33 - C1 -4ZEH - ? -
30 PsiBlast_CBE 69.2738% -33 - C1 -4ZEH - ? -
84 HHSearch 68.9340% -33 - C1 -4ZEH - ? -
31 PsiBlast_CBE 68.5738% -32 - C1 -4ZEH - ? -
12 PsiBlast_PDB 68.5138% -33 - C1 -4ZEN 1.7 ?
27 PsiBlast_CBE 68.2538% -31 - C1 -4ZEP - ? -
38 PsiBlast_CBE 68.2038% -26 - C1 -4ZE5 - ? -
28 PsiBlast_CBE 67.8938% -35 - C1 -4ZEN - ? -
10 PsiBlast_PDB 67.8938% -29 - C1 -4ZE4 - ? -
32 PsiBlast_CBE 67.5038% -31 - C1 -4ZE4 - ? -
14 PsiBlast_PDB 67.4838% -25 - C1 -4ZE5 - ? -
36 PsiBlast_CBE 67.4538% -26 - C1 -4ZE5 - ? -
13 PsiBlast_PDB 67.2738% -33 - C1 -4ZEP - ? -
6 PsiBlast_PDB 65.4948% 26 - C1 -4GPN 4.9 ?
4 PsiBlast_PDB 64.8148% 26 - C1 -4F66 5.6 ?
26 PsiBlast_CBE 64.6148% 22 - C1 -4GPN 6.0 ?
5 PsiBlast_PDB 63.7948% 25 - C1 -4F79 4.8 ?
25 PsiBlast_CBE 63.6448% 28 - C1 -4F66 5.3 ?