@TOME V2.3
(Mar 2018)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Modeled complexes Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor model: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : spr0507: (2017-12-23 )
MSTIEEQLKALREETLTSLKQITAGNEKEMQDLRVSVLGKKGSLTEILKGMKDVSAEMRPIIGKHVNEARDVLTAAFEETAKLLEEKKVAAQLASESIDVTLPGRPVATGHRHVLTQTSEEIEDIFIGMGYQVVDGFEVEQDYYNFERMNLPKDHPARDMQDTFYITEEILLRTHTSPVQARAMDAHDFSKGPLKMISPGRVFRRDTDDATHSHQFHQIEGLVVGKNISMADLQGTLQLIVQKMFGEERQIRLRPSYFPFTEPSVEVDVSCFKCGGEGCNVCKKTGWIEIMGAGMVHPRVLEMSGIDATVYSGFAFGLGQERVAMLRYGINDIRGFYQGDVRFSEQFK

Atome Classification :

(32 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

YSA_A_5(2ALY)
SYFA_THETH
[Raw transfer]




FYA_A_4(1B7Y)
SYFA_THETH
[Raw transfer]




FYA_A_4(1B7Y)
SYFA_THETH
[Raw transfer]




FA5_A_5(1JJC)
SYFA_THET8
[Raw transfer]




FA5_A_3(3CMQ)
SYFM_HUMAN
[Raw transfer]




TYR_A_5(2AMC)
SYFA_THETH
[Raw transfer]




PHE_A_3(4TVA)
SYFA_THETH
[Raw transfer]




PHE_A_4(1B70)
SYFA_THETH
[Raw transfer]




PHE_A_2(5MGW)
SYFM_HUMAN
[Raw transfer]




200_A_5(2AKW)
SYFA_THETH
[Raw transfer]




200_A_5(2AKW)
SYFA_THETH
[Raw transfer]




GAX_A_4(2RHQ)
SYFA_STAHJ
[Raw transfer]




DAH_A_3(3TEH)
SYFA_THETH
[Raw transfer]




MTY_A_3(3HFZ)
SYFA_THET8
[Raw transfer]




1 PsiBlast_PDB 92.8071% -95 - C2 -2RHQ 7.1 SYFA_STAHJ
21 PsiBlast_CBE 91.1371% -95 - C2 -2RHS - SYFA_STAHJ -
51 HHSearch 90.4073% -95 - C2 -2RHS - SYFA_STAHJ -
50 HHSearch 86.0773% -95 - C2 -2RHS - SYFA_STAHJ -
2 PsiBlast_PDB 86.0171% -94 - C2 -2RHS - SYFA_STAHJ -
24 PsiBlast_CBE 82.4449%-114 - C2 -4P73 - SYFA_PSEAE -
45 HHSearch 81.7750%-113 - C2 -4P72 - SYFA_PSEAE -
44 HHSearch 81.4750%-114 - C2 -4P74 - SYFA_PSEAE -
25 PsiBlast_CBE 81.4549%-113 - C2 -4P72 - SYFA_PSEAE -
23 PsiBlast_CBE 81.1149%-114 - C2 -4P74 - SYFA_PSEAE -
5 PsiBlast_PDB 81.0349%-114 - C2 -4P73 - SYFA_PSEAE -
22 PsiBlast_CBE 80.4049%-113 - C2 -4P75 - SYFA_PSEAE -
6 PsiBlast_PDB 80.3349%-111 - C2 -4P74 - SYFA_PSEAE -
7 PsiBlast_PDB 80.1949%-111 - C2 -4P75 - SYFA_PSEAE -
4 PsiBlast_PDB 80.1549%-114 - C2 -4P72 - SYFA_PSEAE -
48 HHSearch 78.1947% -84 - C2 -3PCO - SYFA_ECOLI -
26 PsiBlast_CBE 78.0546% -86 - C2 -3PCO - SYFA_ECOLI -
35 Fugue 74.6945% -13 - C2 -1EIY - SYFA_THET8 -
14 PsiBlast_PDB 73.9942% -17 - C2 -2IY5 - SYFA_THETH -
8 PsiBlast_PDB 73.6446%-107 - C2 -3PCO - SYFA_ECOLI -
52 HHSearch 70.8850% -25 * C2 *2AKW 4.4 SYFA_THETH
20 PsiBlast_PDB 70.8345% -20 - C2 -2AMC 3.8 SYFA_THETH
19 PsiBlast_PDB 70.8045% -18 - C2 -2ALY 9.9 SYFA_THETH
18 PsiBlast_PDB 70.0145% -23 - C2 -2AKW 4.4 SYFA_THETH
17 PsiBlast_PDB 69.4242% -28 - C2 -4TVA 4.6 SYFA_THETH
15 PsiBlast_PDB 69.3642% -28 - C2 -3HFZ 4.2 SYFA_THET8
13 PsiBlast_PDB 68.9042% -23 - C2 -1JJC 9.8 SYFA_THET8
16 PsiBlast_PDB 68.5342% -20 - C2 -3TEH 3.1 SYFA_THETH
46 HHSearch 68.2446% -20 - C2 -1B7Y 8.9 SYFA_THETH
12 PsiBlast_PDB 67.7642% -21 - C2 -1B70 4.0 SYFA_THETH
10 PsiBlast_PDB 66.7842% -21 - C2 -1B7Y 8.9 SYFA_THETH
58 HHSearch 49.7232% 14 - C2 -5MGW 4.8 SYFM_HUMAN