@TOME V2.3
(Mar 2018)

Ref. - - Doc.
Global output mode :
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Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Modeled complexes Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor model: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : spr0509: (2017-12-23 )
MLISYKWLKELVDIDVPSQELAEKMSTTGIEVEGVESPAAGLSKIVVGEVLSCEDVPETHLHVCQVNVGEEERQIVCGAPNVRAGIKVMVALPGARIADNYKIKKGKIRGLESLGMICSLGELGISDSVVPKEFADGIQILPEDAVPGEEVFSYLDLDDEIIELSITPNRADALSMCGVAHEVAAIYDKAVNFKEFTLTETNEAAADALSVSIETDKAPYYAARILDNVTIAPSPQWLQNLLMNEGIRPINNVVDVTNYILLYFGQPMHAFDLDNFEGTDIRVREARAGEKLVTLDGEERDLDVNDLVITVADKPVALAGVMGGQATEISEKSSRVVLEAAVFNGKSIRKTSGRLNLRSESSSRFEKGINVATVNEALDAAASLIAELAGATVRKGIVSAGELDTSDVEVSSTLADVNRVLGTELSYADVEDVFRRLGFGLSGNADSFTVRVPRRRWDITIEADLFEEIARIYGYDRLPTSLPKDDGTAGELTATQKLRRQVRTIAEGAGLTEIITYTLTTPEKAVEFTAQPSNLTELMWPMTVDRSVLRQNMISGILDTVAYNVARKNKNLALYEIGKVFEQTGNPKEELPNEINSFAFALTGLVAEKDFQTAAVPVDFFYAKGILEALFTRLGLQVTYTATSEIASLHPGRTAVISLGDQVLGFLGQVHPVTAKAYDIPETYVAELNLSAIEAALQPATPFVEITKFPAVSRDVALLLKAEVTHQEVVDAIQAAGVKRLTDIKLFDVFSGEKLGLGMKSMAYSLTFQNPEDSLTDEEVARYMEKIQASLEEKVNAEVR

Atome Classification :

(23 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

DAH_B_4(3TEH)
SYFB_THETH
[Raw transfer]



PUY_B_4(4TVA)
SYFB_THETH
[Raw transfer]



TYR_B_6(2AMC)
SYFB_THETH
[Raw transfer]



MTY_B_4(3HFZ)
SYFB_THET8
[Raw transfer]
2 PsiBlast_PDB 74.1445% -2 - C1 -2RHQ - SYFB_STAHJ -
1 PsiBlast_PDB 73.9045% -7 - C1 -2RHS - SYFB_STAHJ -
33 HHSearch 73.5545% -9 - C1 -2RHS - SYFB_STAHJ -
34 HHSearch 73.1345% -1 - C1 -2RHQ - SYFB_STAHJ -
3 PsiBlast_PDB 72.6035% - - C1 -4P71 - SYFB_PSEAE -
4 PsiBlast_PDB 66.0035% -9 - C1 -4P72 - SYFB_PSEAE -
6 PsiBlast_PDB 65.6235% -11 - C1 -4P74 - SYFB_PSEAE -
7 PsiBlast_PDB 65.3035% -10 - C1 -4P75 - SYFB_PSEAE -
36 HHSearch 65.2834% -12 - C1 -1B7Y - SYFB_THETH -
32 HHSearch 65.0036% 3 - C1 -4P72 - SYFB_PSEAE -
5 PsiBlast_PDB 64.7535% -6 - C1 -4P73 - SYFB_PSEAE -
21 Fugue 64.4934% -3 - C1 -1JJC - SYFB_THET8 -
35 HHSearch 63.9434% -10 - C1 -1EIY - SYFB_THET8 -
11 PsiBlast_PDB 62.9733% -10 - C1 -1B7Y - SYFB_THETH -
10 PsiBlast_PDB 62.8033% -9 - C1 -1PYS - SYFB_THET8 -
13 PsiBlast_PDB 62.5733% -10 - C1 -1B70 - SYFB_THETH -
17 PsiBlast_PDB 61.9433% -8 - C1 -2AMC 3.1 SYFB_THETH
8 PsiBlast_PDB 61.7835% 9 - C1 -3PCO - SYFB_ECOLI -
14 PsiBlast_PDB 61.7533% -10 - C1 -1JJC - SYFB_THET8 -
16 PsiBlast_PDB 61.7433% -11 - C1 -2ALY - SYFB_THETH -
19 PsiBlast_PDB 61.7033% -10 - C1 -3TEH 3.0 SYFB_THETH
20 PsiBlast_PDB 61.2833% -10 - C1 -4TVA 6.7 SYFB_THETH
18 PsiBlast_PDB 60.4733% -8 - C1 -3HFZ 2.6 SYFB_THET8