@TOME V2.3
(Mar 2018)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Modeled complexes Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor model: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : spr0517: (2017-12-23 )
MGWWRETIDIVKENDPAARTTLEVLLTYPGVKALAAHRLSHFLWKHGFKLLARMYSQFWRFWTQIEIHPGAQIDSGVFIDHGSGLVIGETAIVEKGVLLYHGVTLGGTGKDCGKRHPTVRKGALISAHAQVIGPVEIGENAKVGAAAVVVADVPSDVTVVGIPAKIVRLHGKKDEPVIHEVEEKREYYVNKLEQAKDASHRSSGL

Atome Classification :

(21 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

CYS_B_8(4H7O)
?
[Raw transfer]




CYS_B_8(4H7O)
?
[Raw transfer]




CYS_A_6(4H7O)
?
[Raw transfer]




CYS_B_4(1T3D)
CYSE_ECOLI
[Raw transfer]




SER_B_5(4N69)
?
[Raw transfer]




SER_B_5(4N69)
?
[Raw transfer]




COA_I_9(1SST)
CYSE_HAEIN
[Raw transfer]




COA_G_7(1SST)
CYSE_HAEIN
[Raw transfer]




SER_A_2(3Q1X)
?
[Raw transfer]




EDO_A_2(5U2K)
ATRF2_STAAC
[Raw transfer]




125 HHSearch 76.4542%-121 - C2 -4H7O 2.7 ?
129 HHSearch 75.4342%-134 - C2 -4N69 3.5 ?
130 HHSearch 75.2942%-139 - C2 -4N6A - ? -
133 HHSearch 74.9144%-116 - C2 -4HZD - ? -
1 PsiBlast_PDB 74.3044%-121 * C2 *4HZD - ? -
116 Fugue 73.9539% -13 - C2 -1SSQ - CYSE_HAEIN -
134 HHSearch 73.7844%-114 - C2 -4HZD - ? -
126 HHSearch 73.6939%-123 - C2 -1SSQ - CYSE_HAEIN -
21 PsiBlast_CBE 73.1344%-119 - C2 -4HZD - ? -
2 PsiBlast_PDB 72.9844%-123 - C2 -4HZC - ? -
12 PsiBlast_PDB 72.8041%-132 - C2 -1SSM - CYSE_HAEIN -
11 PsiBlast_PDB 72.7041%-128 - C2 -1S80 - CYSE_HAEIN -
41 PsiBlast_CBE 71.4941%-132 - C2 -1SSQ - CYSE_HAEIN -
43 PsiBlast_CBE 71.4441%-134 - C2 -1SST 3.7 CYSE_HAEIN
42 PsiBlast_CBE 71.2741%-128 - C2 -1SST 3.4 CYSE_HAEIN
7 PsiBlast_PDB 71.2141%-125 - C2 -1SSQ - CYSE_HAEIN -
8 PsiBlast_PDB 71.0143%-132 - C2 -1T3D 3.5 CYSE_ECOLI
33 PsiBlast_CBE 70.9645%-131 - C2 -4H7O 2.7 ?
50 PsiBlast_CBE 70.8543%-129 - C2 -3GVD - ? -
34 PsiBlast_CBE 70.8045%-127 - C2 -4H7O 2.9 ?
40 PsiBlast_CBE 63.4344% -36 - C2 -4N69 3.5 ?