@TOME V2.3
(Mar 2018)

Ref. - - Doc.
Global output mode :
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Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Modeled complexes Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor model: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : spr0530: (2017-12-24 )
MAIVSAEKFVQAARDNGYAVGGFNTNNLEWTQAILRAAEAKKAPVLIQTSMGAAKYMGGYKVARNLIANLVESMGITVPVAIHLDHGHYEDALECIEVGYTSIMFDGSHLPVEENLKLAKEVVEKAHAKGISVEAEVGTIGGEEDGIIGKGELAPIEDAKAMVETGIDFLAAGIGNIHGPYPVNWEGLDLDHLQKLTEALPGFPIVLHGGSGIPDEQIQAAIKLGVAKVNVNTECQIAFANATRKFARDYEANEAEYDKKKLFDPRKFLADGVKAIQASVEERIDVFGSEGKA

Atome Classification :

(25 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

PH4_A_5(3C56)
ALF_HELPY
[Raw transfer]



2FP_A_2(3ELF)
ALF_MYCTU
[Raw transfer]



TD4_A_3(3N9S)
?
[Raw transfer]



TD4_B_10(3N9S)
?
[Raw transfer]



PH4_B_6(3C56)
ALF_HELPY
[Raw transfer]



PGH_B_12(1GVF)
KBAY_ECOLI
[Raw transfer]



13P_A_8(3Q94)
?
[Raw transfer]



13P_A_8(3Q94)
?
[Raw transfer]



PGH_A_3(1GVF)
KBAY_ECOLI
[Raw transfer]



PGH_B_12(1GVF)
KBAY_ECOLI
[Raw transfer]



PGH_A_5(4DEL)
ALF_MYCTU
[Raw transfer]



CIT_A_3(5U7S)
?
[Raw transfer]



13P_A_2(3EKZ)
ALF_MYCTU
[Raw transfer]



13P_A_2(3EKL)
ALF_MYCTU
[Raw transfer]



G3P_A_4(3EKZ)
ALF_MYCTU
[Raw transfer]
59 HHSearch 87.7249% -24 - C1 -3Q94 4.3 ?
11 PsiBlast_PDB 86.4234% -41 - C1 -5U7S 3.9 ?
31 PsiBlast_CBE 86.1434% -44 - C1 -5U7S - ? -
60 HHSearch 85.0646% -15 - C1 -4TO8 - ? -
64 HHSearch 84.9240% -30 - C1 -1RVG - ? -
68 HHSearch 84.7440% -33 - C1 -5U4N - ? -
1 PsiBlast_PDB 84.1944% -14 - C1 -4TO8 - ? -
2 PsiBlast_PDB 83.9547% -16 - C1 -3Q94 4.3 ?
63 HHSearch 82.7239% -26 * C1 *1GVF 4.0 KBAY_ECOLI
6 PsiBlast_PDB 82.4437% -61 - C1 -3GAK - ? -
10 PsiBlast_PDB 82.3135% -33 - C1 -5U4N - ? -
69 HHSearch 82.2936% -29 - C1 -3PM6 - ALF_COCIM -
49 Fugue 81.3535% -25 - C1 -3PM6 - ALF_COCIM -
8 PsiBlast_PDB 80.7737% -43 - C1 -2ISW - ? -
62 HHSearch 80.7540% -13 - C1 -3N9S - ? -
70 HHSearch 80.2736% -37 - C1 -3PM6 - ALF_COCIM -
61 HHSearch 79.8340% 0 - C- -3N9R - ? -
32 PsiBlast_CBE 79.7335% -15 - C1 -3N9S 5.7 ?
3 PsiBlast_PDB 79.7337% -14 - C1 -1RV8 - ? -
30 PsiBlast_CBE 79.5138% -34 - C1 -1GVF 3.9 KBAY_ECOLI
9 PsiBlast_PDB 79.1038% -40 - C1 -1GVF 3.6 KBAY_ECOLI
20 PsiBlast_PDB 64.1130% -7 - C1 -3ELF 4.8 ALF_MYCTU
19 PsiBlast_PDB 63.9130% -8 - C1 -3EKZ 3.5 ALF_MYCTU
73 HHSearch 63.6130% 13 - C1 -4DEL 4.0 ALF_MYCTU
18 PsiBlast_PDB 63.2830% -4 - C1 -3EKL 3.3 ALF_MYCTU