@TOME V2.3
(Mar 2018)

Ref. - - Doc.
Global output mode :
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Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Modeled complexes Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor model: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : spr0536: (2017-12-24 )
MALVEFKNVEKYYGDYHALRNINLRFEKGQVVVLLGPSGSGKSTLIRTINGLEAVDKGSLLVNGHQVAGASQKDLVPLRKEVGMVFQHFNLYPHKTVLENVTLAPIKVLGIDKKEAEKTAQKYLEFVNM

Atome Classification :

(28 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

ATP_A_6(4YMV)
?
[Raw transfer]



AGS_B_6(3C4J)
?
[Raw transfer]



ANP_J_5(3C41)
?
[Raw transfer]



ATP_A_5(1B0U)
HISP_SALTY
[Raw transfer]



ATP_J_5(4YMU)
?
[Raw transfer]



AGS_A_4(3C4J)
?
[Raw transfer]



ATP_A_7(4YMU)
?
[Raw transfer]



ATP_J_5(4YMV)
?
[Raw transfer]



ANP_K_6(3C41)
?
[Raw transfer]



ADP_A_5(2Q0H)
?
[Raw transfer]



ADP_A_5(2OLJ)
?
[Raw transfer]



ADP_A_2(4U00)
?
[Raw transfer]



AT4_B_6(2OLK)
?
[Raw transfer]



ADP_B_6(2OLJ)
?
[Raw transfer]



AT4_D_8(2OLK)
?
[Raw transfer]



AT4_C_7(2OLK)
?
[Raw transfer]



IPA_A_6(3TIF)
Y796_METJA
[Raw transfer]
1 PsiBlast_PDB 82.3848%-107 - C1 -4U00 6.5 ?
9 PsiBlast_PDB 77.5242%-122 - C1 -2OLJ 6.3 ?
33 PsiBlast_CBE 77.4542%-122 - C1 -2OLK 6.3 ?
53 PsiBlast_CBE 76.6837%-104 - C1 -3PUW - MALK_ECOLI -
13 PsiBlast_PDB 76.6142%-110 - C1 -3C4J 7.1 ?
55 PsiBlast_CBE 76.6037%-108 - C1 -3PUV - MALK_ECOLI -
43 PsiBlast_CBE 76.2737%-108 - C1 -4KI0 - MALK_ECOLI -
2 PsiBlast_PDB 76.2648% -96 - C1 -4U02 - ? -
10 PsiBlast_PDB 75.7842%-117 - C1 -2OLK - ? -
51 PsiBlast_CBE 75.7337%-103 - C1 -3PUX - MALK_ECOLI -
4 PsiBlast_PDB 75.6648%-114 - C1 -4YMT - ? -
34 PsiBlast_CBE 75.4642%-102 - C1 -2OLK 6.5 ?
27 PsiBlast_CBE 75.3542%-106 - C1 -3C4J 5.1 ?
44 PsiBlast_CBE 75.1437%-102 - C1 -3RLF - MALK_ECOLI -
8 PsiBlast_PDB 74.7642%-104 - C1 -3C41 7.4 ?
49 PsiBlast_CBE 74.7037%-104 - C1 -3PUY - MALK_ECOLI -
5 PsiBlast_PDB 74.5048%-103 - C1 -4YMU 5.7 ?
32 PsiBlast_CBE 74.2942%-108 - C1 -2OLK 6.2 ?
11 PsiBlast_PDB 73.8942%-109 - C1 -2OUK - ? -
45 PsiBlast_CBE 73.2037%-110 - C1 -3RLF - MALK_ECOLI -
25 PsiBlast_CBE 73.1048%-110 - C1 -4YMU 5.7 ?
26 PsiBlast_CBE 72.0342%-121 - C1 -3C41 6.1 ?
6 PsiBlast_PDB 70.5748%-111 - C1 -4YMV 4.1 ?
12 PsiBlast_PDB 70.4642%-107 - C1 -2Q0H 5.6 ?
24 PsiBlast_CBE 69.2648%-100 - C1 -4YMV 5.1 ?
35 PsiBlast_CBE 68.9842% -93 - C1 -2OLJ 5.8 ?
64 PsiBlast_CBE 63.5444% -57 - C1 -1B0U 6.0 HISP_SALTY
78 PsiBlast_CBE 47.9439% 41 - C1 -3TIF 3.8 Y796_METJA