@TOME V2.3
(Mar 2018)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Modeled complexes Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor model: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : spr0576: (2017-12-25 )
MNKMERNINMKKWQTCVLGAGSLLCLTACSGKSVTSEHQTKDEMKTEQTASKTSAAKGKEVADFELMGVDGKTYRLSDYKGKKVYLKFWASWCSICLASLPDTDEIAKEAGDDYVVLTVVSPGHKGEQSEADFKNWYKGLDYKNLPVLVDPSGKLLETYGVRSYPTQAFIDKEGKLVKTHPGFMEKDAILQTLKELS

Atome Classification :

(20 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

GOL_A_3(4HQS)
?
[Raw transfer]




GOL_A_3(4HQS)
?
[Raw transfer]




C6W_B_8(2YP6)
?
[Raw transfer]




C6W_D_14(2YP6)
?
[Raw transfer]




HED_B_5(4HQZ)
?
[Raw transfer]




HED_A_3(4HQZ)
?
[Raw transfer]




1 PsiBlast_PDB 86.4798%-103 - C2 -4HQS 3.6 ?
2 PsiBlast_PDB 85.2299% - - C- -4EVM - ? -
92 HHSearch 77.9293% - - C- -4EVM - ? -
88 HHSearch 77.5194% -13 - C2 -4HQS 3.6 ?
84 HHSearch 69.9342%-111 - C2 -2YP6 - ? -
87 HHSearch 68.9141%-101 - C2 -4HQZ - ? -
21 PsiBlast_CBE 67.9838% -96 - C2 -4HQZ Error ?
3 PsiBlast_PDB 64.7038% -94 - C2 -4HQZ 1.2 ?
26 PsiBlast_CBE 62.9932%-135 - C2 -2H1B - RESA_BACSU -
25 PsiBlast_CBE 62.4432%-148 - C2 -2H1B - RESA_BACSU -
30 PsiBlast_CBE 62.2732%-144 - C2 -2H19 - RESA_BACSU -
15 PsiBlast_PDB 62.1432%-140 - C2 -2H1D - RESA_BACSU -
18 PsiBlast_PDB 62.0432%-140 - C2 -2H19 - RESA_BACSU -
17 PsiBlast_PDB 61.9833%-151 - C2 -3C73 - RESA_BACSU -
11 PsiBlast_PDB 61.8032%-137 - C2 -2H1B - RESA_BACSU -
23 PsiBlast_CBE 61.7439% 23 - C2 -2YP6 - ? -
12 PsiBlast_PDB 60.9832%-138 - C2 -3C71 - RESA_BACSU -
19 PsiBlast_PDB 60.8532%-145 - C2 -2H1A - RESA_BACSU -
13 PsiBlast_PDB 60.7432%-125 - C2 -1ST9 - RESA_BACSU -
20 PsiBlast_PDB 60.4831%-133 - C2 -2H1G - RESA_BACSU -