@TOME V2.3
(Mar 2018)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Modeled complexes Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor model: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : spr0602: (2017-12-25 )
MIELKNISKKFGSRQLFSDTNLHFEGGKIYALIGTSGCGKTTLLNMIGRLEPYDKGQIIYDGTSLKDIKPSVFFRDYLGYLFQDFGLIESQTVKENLNLGLVGKKLKEKEKISLMKQALNRVNLSYLDLKQPIFELSGGEAQRVALAKIILKDPPLILADEPTASLDPKNSEELLSILESLKNPNRTIIIATHNPLIWEQVDQVIRVTDLSHR

Atome Classification :

(21 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

ATP_A_6(4YMV)
?
[Raw transfer]



ANP_K_6(3C41)
?
[Raw transfer]



ATP_J_5(4YMV)
?
[Raw transfer]



AGS_B_6(3C4J)
?
[Raw transfer]



AGS_A_4(3C4J)
?
[Raw transfer]



ANP_B_5(5EG1)
MCJD_ECOLX
[Raw transfer]



ADP_A_5(2OLJ)
?
[Raw transfer]



ADP_A_5(2Q0H)
?
[Raw transfer]



AT4_B_6(2OLK)
?
[Raw transfer]



ATP_C_3(1VCI)
?
[Raw transfer]



AT4_D_8(2OLK)
?
[Raw transfer]



IPA_A_6(3TIF)
Y796_METJA
[Raw transfer]
10 PsiBlast_PDB 84.9131% 0 - C- -5NIL - ? -
9 PsiBlast_PDB 84.9131% 0 - C- -5NIK - ? -
14 PsiBlast_PDB 81.2435% -26 - C1 -4YMV 5.6 ?
34 PsiBlast_CBE 80.3135% -33 - C1 -4YMV 5.4 ?
13 PsiBlast_PDB 79.9235% -32 - C1 -4YMU - ? -
112 HHSearch 79.4029%-120 * C1 *3RLF - MALK_ECOLI -
35 PsiBlast_CBE 79.0035% -32 - C1 -4YMU - ? -
15 PsiBlast_PDB 77.8035% -32 - C1 -4YMW - ? -
12 PsiBlast_PDB 76.7535% -30 - C1 -4YMT - ? -
111 HHSearch 76.3129%-112 - C1 -2AWN - MALK_ECOLI -
11 PsiBlast_PDB 75.3935% -25 - C1 -4YMS - ? -
127 HHSearch 71.7328%-102 - C1 -2YYZ - ? -
37 PsiBlast_CBE 70.7134% -60 - C1 -4HLU - ECFA1_THEMA -
129 HHSearch 70.3129%-115 - C1 -4TQU - ? -
50 PsiBlast_CBE 68.9432% -36 - C1 -4KI0 - MALK_ECOLI -
60 PsiBlast_CBE 68.1432% -35 - C1 -3PUW - MALK_ECOLI -
62 PsiBlast_CBE 67.1732% -37 - C1 -3PUV - MALK_ECOLI -
53 PsiBlast_CBE 66.8732% -35 - C1 -3PUZ - MALK_ECOLI -
58 PsiBlast_CBE 66.3432% -33 - C1 -3PUX - MALK_ECOLI -
54 PsiBlast_CBE 66.1732% -31 - C1 -3PUZ - MALK_ECOLI -
75 PsiBlast_CBE 60.8131%-111 - C1 -1VCI 5.3 ?