@TOME V2.3
(Mar 2018)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Modeled complexes Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor model: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : spr0626: (2017-12-26 )
MSTEHMEELNDQQIVRREKMAALREQGIDPFGKRFERTANSQELKDKYANLDKEQLHDKNETATIAGRLVTKRGKGKVGFAHLQDREGQIQIYVRKDAVGEENYEIFKKADLGDFLGVEGEVMRTDMGELSIKATHITHLSKALRPLPEKFHGLTDVETIYRKRYLDLISNRESFERFVTRSKIISEIRRYLDQKGFLEVETPVLHNEAGGAAARPFITHHNAQNIDMVLRIATELHLKRLIVGGMERVYEIGRIFRNEGMDATHNPEFTSIEVYQAYADFQDIMDLTEGIIQHAAKSVKGDGPVNYQGTEIKINEPFKRVHMVDAIREITGVDFWQDMTLEEAKAIAAEKKVPVEKHYTEVGHIINAFFEEFVEETLIQPTFVYGHPVAVSPLAKKNPEDQRFTDRFELFIMTKEYGNAFTELNDPIDQLSRFEAQAKAKELGDDEATGIDYDYIEALEYGMPPTGGLGIGIDRLCMLLTDTTTIRDVLLFPTMK

Atome Classification :

(33 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

LAD_A_2(4UP7)
?
[Raw transfer]



ATP_A_3(1E24)
SYK2_ECOLI
[Raw transfer]



LAD_B_2(1E1T)
SYK2_ECOLI
[Raw transfer]



ACP_A_3(1E22)
SYK2_ECOLI
[Raw transfer]



LAD_A_2(4UP7)
?
[Raw transfer]



ANP_A_2(4UPA)
?
[Raw transfer]



ATP_A_2(4UP9)
?
[Raw transfer]



GOL_B_9(1E1T)
SYK2_ECOLI
[Raw transfer]



GOL_B_11(1E1O)
SYK2_ECOLI
[Raw transfer]



KRS_A_4(4YCU)
SYK_HUMAN
[Raw transfer]



KRS_A_4(4YCU)
SYK_HUMAN
[Raw transfer]



KRS_B_8(4YCU)
SYK_HUMAN
[Raw transfer]



LYS_A_3(4EX5)
SYK_BURTA
[Raw transfer]



LYS_B_4(4EX5)
SYK_BURTA
[Raw transfer]



LYS_C_3(1BBU)
SYK1_ECOLI
[Raw transfer]



LYS_B_4(4EX5)
SYK_BURTA
[Raw transfer]



LYS_C_3(1BBU)
SYK1_ECOLI
[Raw transfer]



LYS_B_3(1E1O)
SYK2_ECOLI
[Raw transfer]



LYS_B_3(1E1O)
SYK2_ECOLI
[Raw transfer]
22 PsiBlast_CBE 99.1862% -82 - C6 -3E9I - SYK_GEOSE -
27 PsiBlast_CBE 99.1362% -81 - C6 -3A74 - SYK_GEOSE -
3 PsiBlast_PDB 99.1262% -81 - C6 -3A74 - SYK_GEOSE -
93 HHSearch 99.0962% -80 - C6 -3A74 - SYK_GEOSE -
29 PsiBlast_CBE 98.9762% -81 - C6 -3A74 - SYK_GEOSE -
1 PsiBlast_PDB 98.8062% -81 - C6 -3E9H - SYK_GEOSE -
28 PsiBlast_CBE 98.7762% -80 - C6 -3A74 - SYK_GEOSE -
2 PsiBlast_PDB 98.5862% -80 - C6 -3E9I - SYK_GEOSE -
25 PsiBlast_CBE 98.3862% -82 - C6 -3E9H - SYK_GEOSE -
21 PsiBlast_CBE 98.0862% -81 - C6 -3E9I - SYK_GEOSE -
24 PsiBlast_CBE 98.0662% -81 - C6 -3E9H - SYK_GEOSE -
26 PsiBlast_CBE 97.5062% -80 - C6 -3E9H - SYK_GEOSE -
92 HHSearch 97.3962% -79 - C6 -3E9H - SYK_GEOSE -
23 PsiBlast_CBE 96.9262% -77 - C6 -3E9I - SYK_GEOSE -
87 HHSearch 85.4249% -51 - C6 -4EX5 3.0 SYK_BURTA
6 PsiBlast_PDB 81.2149% 6 - C6 -1LYL - SYK2_ECOLI -
4 PsiBlast_PDB 80.9850% 3 - C6 -1BBU 2.8 SYK1_ECOLI
30 PsiBlast_CBE 80.7149% 3 - C6 -1LYL - SYK2_ECOLI -
10 PsiBlast_PDB 80.6949% 5 - C6 -1E24 6.9 SYK2_ECOLI
31 PsiBlast_CBE 80.6649% 5 - C6 -1LYL - SYK2_ECOLI -
7 PsiBlast_PDB 80.5149% 3 - C6 -1E1O 3.1 SYK2_ECOLI
83 HHSearch 80.4749% 4 - C6 -1E1O 3.1 SYK2_ECOLI
84 HHSearch 80.3850% 4 - C6 -1BBU 2.8 SYK1_ECOLI
8 PsiBlast_PDB 80.1449% 5 - C6 -1E1T 8.1 SYK2_ECOLI
9 PsiBlast_PDB 80.1249% 3 - C6 -1E22 6.7 SYK2_ECOLI
96 HHSearch 76.1543% 15 - C6 -4UP7 7.5 ?
15 PsiBlast_PDB 75.3242% 15 - C6 -4YCU 6.1 SYK_HUMAN
85 HHSearch 74.8743% 16 * C6 *4YCU 6.1 SYK_HUMAN
38 PsiBlast_CBE 74.6742% 19 - C6 -4YCU 6.5 SYK_HUMAN
32 PsiBlast_CBE 73.6449% 36 - C6 -4EX5 3.0 SYK_BURTA
11 PsiBlast_PDB 73.6249% 37 - C6 -4EX5 3.1 SYK_BURTA
63 PsiBlast_CBE 60.8335% 36 - C6 -4UPA 5.9 ?
64 PsiBlast_CBE 60.1735% 34 - C6 -4UP9 5.2 ?