@TOME V2.3
(Mar 2018)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Modeled complexes Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor model: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : spr0627: (2017-12-26 )
MSYKTSNAEGHVDFINTYDLEPMAQQVIPKAAFGYIASGAEDTFTLRENIRAFNHKLIVPHTLCDVENPSTEIEFAGEKLSSPIIMAPVAAHKLANEQGEVATARGVHEFGSLYTTSSYSTVDLPEISEALQGTPHWFQFYFSKDDGINRHIMDRVKAEGYKAIVLTADATVGGNREVDKRNGFVFPVGMPIVEEYLPEGAGKSMDFVYKSAKQRLSPRDVEFIAEYSGLPVYVKGPQCREDVERSLAAGASGIWVTNHGGRQIDGGPAAFDSLQEVAEAVDRRVPIVFDSGVRRGQHVFKALASGADLVAIGRPVIYGLALGGSVGVRQVFEHLNAELKTVMQLSGAQTIEDVKHFKLRHNPYNPTFPVDPRDLKLY

Atome Classification :

(39 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

FNS_G_7(1QCW)
CYB2_YEAST
[Raw transfer]



PYR_B_7(1LDC)
CYB2_YEAST
[Raw transfer]



PYR_I_9(1SZF)
CYB2_YEAST
[Raw transfer]



PYR_B_6(1FCB)
CYB2_YEAST
[Raw transfer]



173_I_9(1SZE)
CYB2_YEAST
[Raw transfer]



GLV_A_3(2RDU)
HAOX1_HUMAN
[Raw transfer]



PYR_K_11(1SZF)
CYB2_YEAST
[Raw transfer]



PYR_B_7(1KBI)
CYB2_YEAST
[Raw transfer]



173_K_11(1SZE)
CYB2_YEAST
[Raw transfer]



PPY_A_5(1LCO)
CYB2_YEAST
[Raw transfer]



GLV_A_3(2RDU)
HAOX1_HUMAN
[Raw transfer]



PYR_B_7(1KBI)
CYB2_YEAST
[Raw transfer]



PYR_B_6(2OZ0)
CYB2_YEAST
[Raw transfer]



2RD_A_3(2RDT)
HAOX1_HUMAN
[Raw transfer]



FMN_B_5(2ZFA)
?
[Raw transfer]



FMN_B_6(2NLI)
?
[Raw transfer]



DHP_I_9(1AL8)
GOX_SPIOL
[Raw transfer]



FMN_A_3(2NLI)
?
[Raw transfer]



FMN_A_3(2NLI)
?
[Raw transfer]



PYR_A_5(1LDC)
CYB2_YEAST
[Raw transfer]



FMN_A_3(2ZFA)
?
[Raw transfer]



PPY_B_7(1LCO)
CYB2_YEAST
[Raw transfer]



EDO_B_6(1KBJ)
CYB2_YEAST
[Raw transfer]



EDO_B_6(2ZFA)
?
[Raw transfer]



EDO_A_4(1KBJ)
CYB2_YEAST
[Raw transfer]



EDO_A_4(2ZFA)
?
[Raw transfer]
29 PsiBlast_CBE 91.7452% -75 - C2 -5EBU - ? -
33 PsiBlast_CBE 90.7452% -73 - C2 -5EBU - ? -
21 PsiBlast_CBE 90.4552% -36 - C2 -4YL2 - ? -
1 PsiBlast_PDB 90.3052% -34 - C2 -4YL2 - ? -
6 PsiBlast_PDB 90.1352% -75 - C2 -2E77 - ? -
26 PsiBlast_CBE 89.5452% -36 - C2 -2J6X - ? -
24 PsiBlast_CBE 89.5052% -76 - C2 -2J6X - ? -
31 PsiBlast_CBE 89.2652% -38 - C2 -5EBU - ? -
34 PsiBlast_CBE 89.2552% -36 - C2 -5EBU - ? -
22 PsiBlast_CBE 88.9552% -34 - C2 -4YL2 - ? -
36 PsiBlast_CBE 88.9252% -83 - C2 -2ZFA 10.5 ?
42 PsiBlast_CBE 88.9152% -34 - C2 -2DU2 - ? -
41 PsiBlast_CBE 88.8752% -35 - C2 -2DU2 - ? -
40 PsiBlast_CBE 88.7952% -33 - C2 -2DU2 - ? -
39 PsiBlast_CBE 88.7952% -33 - C2 -2E77 - ? -
37 PsiBlast_CBE 88.7252% -33 - C2 -2E77 - ? -
43 PsiBlast_CBE 88.7153% -91 - C2 -2NLI 11.0 ?
4 PsiBlast_PDB 88.6652% -34 - C2 -5EBU - ? -
38 PsiBlast_CBE 88.5352% -73 - C2 -2E77 - ? -
27 PsiBlast_CBE 88.5152% -33 - C2 -2J6X - ? -
8 PsiBlast_PDB 86.5353% -36 - C2 -2NLI 10.8 ?
7 PsiBlast_PDB 86.0152% -34 - C2 -2ZFA 10.8 ?
104 HHSearch 84.6652% -27 - C2 -2NLI 10.8 ?
14 PsiBlast_PDB 75.0034% -37 - C2 -2RDU 3.5 HAOX1_HUMAN
94 HHSearch 74.0235% -23 - C2 -2RDU 2.8 HAOX1_HUMAN
59 PsiBlast_CBE 61.8731% 4 - C2 -1KBJ 3.1 CYB2_YEAST
63 PsiBlast_CBE 61.2431% -1 - C2 -1LDC 3.1 CYB2_YEAST
64 PsiBlast_CBE 61.1031% 1 - C2 -1LDC 4.2 CYB2_YEAST
60 PsiBlast_CBE 61.0531% 5 - C2 -1KBJ 2.2 CYB2_YEAST
103 HHSearch 60.5231% 5 - C2 -1KBI 2.2 CYB2_YEAST
57 PsiBlast_CBE 60.3931% 1 - C2 -1FCB 3.9 CYB2_YEAST
66 PsiBlast_CBE 60.2631% 0 - C2 -1LCO 3.6 CYB2_YEAST
65 PsiBlast_CBE 60.1431% 5 - C2 -1LCO 2.9 CYB2_YEAST
56 PsiBlast_CBE 59.9931% 6 - C2 -1KBI 2.9 CYB2_YEAST
62 PsiBlast_CBE 59.5431% 5 - C2 -1SZE 3.0 CYB2_YEAST
69 PsiBlast_CBE 59.2031% 6 - C2 -1SZF 2.2 CYB2_YEAST
70 PsiBlast_CBE 58.7331% 15 - C2 -1SZF 3.7 CYB2_YEAST
71 PsiBlast_CBE 56.8631% 19 - C2 -2OZ0 3.8 CYB2_YEAST
61 PsiBlast_CBE 54.5831% 8 - C2 -1SZE 3.5 CYB2_YEAST