@TOME V2.3
(Mar 2018)

Ref. - - Doc.
Global output mode :
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Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Modeled complexes Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor model: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : spr0642: (2017-12-26 )
MTQGKITASAAMLNVLKTWGVDTIYGIPSGTLSSLMDALAEDKDIRFLQVRHEETGALAAVMQAKFGGSIGVAVGSGGPGATHLINGVYDAAMDDTPFLAILGSRPVNELNMDAFQELNQNPMYNGIAVYNKRVAYAEQLPKVIDEACRAAISKKGPAVVEIPVNFGFQEIDENSYYGSGSYERSFIAPALNEVEIDKAVEILNNAERPVIYAGFGGVKAGEVITELSRKIKAPIITTGKNFEAFEWNYEGLTGSAYRVGWKPANEVVFEADTVLFLGSNFAFAEVYEAFKNTEKFIQVDIDPYKLGKRHALDASILGDAGQAAKAILDKVNPVESTPWWRANVKNNQNWRDYMNKLEGKTEGELQLYQVYNAINKHADQDAIYSIDVGNTTQTSTRHLHMTPKNMWRTSPLFATMGIALPGGIAAKKDNPDRQVWNIMGDGAFNMCYPDVITNVQYDLPVINLVFSNAEYGFIKNKYEDTNKHLFGVDFTNADYAKIAEAQGAVGFTVDRIEDIDAVVAEAVKLNKEGKTVVIDARITQHRPLPVEVLELDPKLHSEEAIKAFKEKYEAEELVPFRLFLEEEGLQSRAIK

Atome Classification :

(28 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

FAD_A_6(2DJI)
?
[Raw transfer]



FAD_A_6(2DJI)
?
[Raw transfer]



FAD_A_7(1V5F)
?
[Raw transfer]



FAD_A_6(1V5E)
?
[Raw transfer]



FAD_A_3(1V5G)
?
[Raw transfer]



TDK_A_7(2EZ9)
POXB_LACPL
[Raw transfer]



HTL_A_7(2EZU)
POXB_LACPL
[Raw transfer]



TDK_B_9(2EZ9)
POXB_LACPL
[Raw transfer]



TDM_B_16(4FEE)
?
[Raw transfer]



TDM_B_21(4FEG)
?
[Raw transfer]



HTL_B_10(2EZU)
POXB_LACPL
[Raw transfer]



TDP_B_14(4KGD)
?
[Raw transfer]



TDP_A_6(4KGD)
?
[Raw transfer]



TPP_A_9(2EZ4)
POXB_LACPL
[Raw transfer]



TDP_B_14(4KGD)
?
[Raw transfer]



TDL_A_7(2EZ8)
POXB_LACPL
[Raw transfer]



TPP_B_11(2EZ4)
POXB_LACPL
[Raw transfer]



TDM_A_10(4FEE)
?
[Raw transfer]



TPP_B_7(1POW)
POXB_LACPL
[Raw transfer]



TDL_B_10(2EZ8)
POXB_LACPL
[Raw transfer]



TDM_A_10(4FEG)
?
[Raw transfer]



TPP_A_5(1POW)
POXB_LACPL
[Raw transfer]



TDM_A_9(2EZT)
POXB_LACPL
[Raw transfer]



TPP_B_9(1POX)
POXB_LACPL
[Raw transfer]



TPP_B_9(1POX)
POXB_LACPL
[Raw transfer]



TDM_B_12(2EZT)
POXB_LACPL
[Raw transfer]



TPP_A_7(1POX)
POXB_LACPL
[Raw transfer]
34 HHSearch 87.0769% 3 - C4 -2DJI 12.7 ?
1 PsiBlast_PDB 86.8868% 1 - C4 -1V5F 12.7 ?
4 PsiBlast_PDB 86.5268% -1 - C4 -2DJI 12.7 ?
3 PsiBlast_PDB 86.1068% 1 - C4 -1V5E 12.6 ?
2 PsiBlast_PDB 85.8368% 2 - C4 -1V5G 12.7 ?
15 PsiBlast_PDB 80.5048% -17 - C4 -2EZU 8.2 POXB_LACPL
11 PsiBlast_PDB 80.1948% -16 - C4 -2EZ4 8.4 POXB_LACPL
13 PsiBlast_PDB 79.9248% -17 - C4 -2EZ9 7.0 POXB_LACPL
28 PsiBlast_CBE 79.8548% -16 - C4 -1POW 7.4 POXB_LACPL
5 PsiBlast_PDB 79.7848% -20 - C4 -1POX 7.9 POXB_LACPL
14 PsiBlast_PDB 79.7148% -16 - C4 -2EZT 8.4 POXB_LACPL
33 PsiBlast_CBE 79.6848% -15 - C4 -2EZ4 8.0 POXB_LACPL
21 PsiBlast_CBE 79.5848% -17 - C4 -1POX 7.9 POXB_LACPL
7 PsiBlast_PDB 79.4748% -16 - C4 -4FEG 8.4 ?
25 PsiBlast_CBE 79.4548% -16 - C4 -1Y9D - POXB_LACPL -
30 PsiBlast_CBE 79.4348% -15 - C4 -2EZT 8.5 POXB_LACPL
31 PsiBlast_CBE 79.3948% -16 - C4 -2EZ9 7.2 POXB_LACPL
12 PsiBlast_PDB 79.3648% -15 - C4 -2EZ8 7.2 POXB_LACPL
10 PsiBlast_PDB 79.3648% -17 - C4 -1POW 7.6 POXB_LACPL
32 PsiBlast_CBE 79.1148% -14 - C4 -2EZ8 7.2 POXB_LACPL
24 PsiBlast_CBE 78.9548% -14 - C4 -4FEE 8.2 ?
8 PsiBlast_PDB 78.8648% -16 - C4 -4KGD 8.1 ?
6 PsiBlast_PDB 78.6348% -15 - C4 -4FEE 8.3 ?
29 PsiBlast_CBE 78.5348% -15 - C4 -2EZU 8.4 POXB_LACPL
23 PsiBlast_CBE 78.3648% -15 - C4 -4FEG 8.2 ?
22 PsiBlast_CBE 78.3448% -15 - C4 -4KGD 8.3 ?
35 HHSearch 76.0648% 0 - C4 -1POX 7.9 POXB_LACPL
37 HHSearch 74.9748% 1 - C4 -4KGD 8.3 ?