@TOME V2.3
(Mar 2018)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Modeled complexes Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor model: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : spr0655: (2017-12-26 )
MGKIEVINHPLIQHKLSILRRTDTSTKAFRELVDEIAMLMGYEVLRDLPLEDVEIETPITKTVQKQLAGKKLAIVPILRAGIGMVDGLLSLVPAAKVGHIGMYRDEETLQPVEYLVKLPEDIDQRQIFVVDPMLATGGSAILAVDSLKKRGASNIKFVCLVSAPEGVKALQEAHPDVEIFTAALDERLNEHGYIVPGLGDAGDRLFGTK

Atome Classification :

(37 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

U5P_C_3(1I5E)
UPP_BACCL
[Raw transfer]




U5P_D_4(1I5E)
UPP_BACCL
[Raw transfer]




U5P_C_3(1I5E)
UPP_BACCL
[Raw transfer]




U5P_B_11(1UPU)
UPP_TOXGO
[Raw transfer]




U5P_D_9(1UPU)
UPP_TOXGO
[Raw transfer]




U5P_B_11(1UPU)
UPP_TOXGO
[Raw transfer]




U5P_O_15(1O5O)
UPP_THEMA
[Raw transfer]




U5P_Q_17(1O5O)
UPP_THEMA
[Raw transfer]




U5P_A_12(1UPU)
UPP_TOXGO
[Raw transfer]




U5P_N_14(1O5O)
UPP_THEMA
[Raw transfer]




U5P_P_16(1O5O)
UPP_THEMA
[Raw transfer]




U5P_N_14(1O5O)
UPP_THEMA
[Raw transfer]




PRP_A_7(3G6W)
UPP_SULSO
[Raw transfer]




U5P_C_10(1UPU)
UPP_TOXGO
[Raw transfer]




PRP_B_16(1JLS)
UPP_TOXGO
[Raw transfer]




URA_A_16(1BD4)
UPP_TOXGO
[Raw transfer]




URA_B_15(1BD4)
UPP_TOXGO
[Raw transfer]




URA_D_18(1JLS)
UPP_TOXGO
[Raw transfer]




URA_B_15(1JLS)
UPP_TOXGO
[Raw transfer]




URF_B_19(1UPF)
UPP_TOXGO
[Raw transfer]




URA_C_14(1BD4)
UPP_TOXGO
[Raw transfer]




URA_D_13(1BD4)
UPP_TOXGO
[Raw transfer]




URA_C_19(1JLS)
UPP_TOXGO
[Raw transfer]




HSX_C_13(3G6W)
UPP_SULSO
[Raw transfer]




URA_A_17(1JLS)
UPP_TOXGO
[Raw transfer]




URF_D_17(1UPF)
UPP_TOXGO
[Raw transfer]




URF_A_20(1UPF)
UPP_TOXGO
[Raw transfer]




URF_C_18(1UPF)
UPP_TOXGO
[Raw transfer]




HSX_D_18(3G6W)
UPP_SULSO
[Raw transfer]




POP_B_12(3G6W)
UPP_SULSO
[Raw transfer]




POP_C_14(3G6W)
UPP_SULSO
[Raw transfer]




ACY_I_9(1XTT)
UPP_SULSO
[Raw transfer]




ACY_J_10(1XTT)
UPP_SULSO
[Raw transfer]




83 HHSearch 92.6871%-165 - C3 -1I5E 5.6 UPP_BACCL
21 PsiBlast_CBE 92.6870%-164 - C3 -1I5E 5.6 UPP_BACCL
1 PsiBlast_PDB 92.3770%-165 - C3 -1I5E 5.6 UPP_BACCL
3 PsiBlast_PDB 86.2457%-168 - C3 -1V9S - UPP_THET2 -
85 HHSearch 86.0657%-164 - C3 -1O5O 6.8 UPP_THEMA
2 PsiBlast_PDB 86.0457%-164 - C3 -1O5O 6.8 UPP_THEMA
23 PsiBlast_CBE 85.6557%-159 - C3 -1O5O 6.6 UPP_THEMA
22 PsiBlast_CBE 85.0557%-164 - C3 -1O5O 6.4 UPP_THEMA
24 PsiBlast_CBE 84.9857%-162 - C3 -1O5O 6.3 UPP_THEMA
4 PsiBlast_PDB 84.4656%-145 - C3 -2EHJ - UPP_ECOLI -
94 HHSearch 82.8358% -89 - C3 -3DMP - UPP_BURPS -
93 HHSearch 82.0358% -84 - C3 -3DMP - UPP_BURPS -
5 PsiBlast_PDB 82.0357%-107 - C3 -3DMP - UPP_BURPS -
92 HHSearch 81.8759% -82 - C3 -1V9S - UPP_THET2 -
89 HHSearch 81.6049%-158 - C3 -5E38 - UPP_MYCTU -
90 HHSearch 79.7256% -86 - C3 -2EHJ - UPP_ECOLI -
7 PsiBlast_PDB 75.4142%-149 - C3 -2E55 - UPP_AQUAE -
31 PsiBlast_CBE 72.3836%-108 - C3 -1UPU 4.9 UPP_TOXGO
36 PsiBlast_CBE 72.1736%-102 - C3 -1UPF 3.3 UPP_TOXGO
34 PsiBlast_CBE 72.1336%-105 - C3 -1UPF 2.9 UPP_TOXGO
38 PsiBlast_CBE 71.7036%-104 - C3 -1JLS 3.0 UPP_TOXGO
45 PsiBlast_CBE 71.6236%-106 - C3 -1BD4 3.2 UPP_TOXGO
9 PsiBlast_PDB 71.1536%-107 - C3 -1UPF 4.3 UPP_TOXGO
35 PsiBlast_CBE 71.0636%-105 - C3 -1UPF 2.8 UPP_TOXGO
43 PsiBlast_CBE 70.9136%-107 - C3 -1BD4 3.9 UPP_TOXGO
11 PsiBlast_PDB 70.8936% -98 - C3 -1BD4 2.9 UPP_TOXGO
32 PsiBlast_CBE 70.8636%-106 - C3 -1UPU 4.8 UPP_TOXGO
8 PsiBlast_PDB 70.7636%-104 - C3 -1UPU 4.4 UPP_TOXGO
39 PsiBlast_CBE 70.6936%-109 - C3 -1JLS 3.3 UPP_TOXGO
12 PsiBlast_PDB 70.6936%-102 - C3 -1JLS 2.9 UPP_TOXGO
33 PsiBlast_CBE 70.6536%-104 - C3 -1UPU 5.5 UPP_TOXGO
95 HHSearch 70.4335% -75 * C3 *1UPU 4.8 UPP_TOXGO
44 PsiBlast_CBE 70.2436% -99 - C3 -1BD4 2.3 UPP_TOXGO
37 PsiBlast_CBE 70.0136%-102 - C3 -1JLS 3.1 UPP_TOXGO
50 PsiBlast_CBE 66.7535% -50 - C3 -3G6W 3.5 UPP_SULSO
49 PsiBlast_CBE 65.4935% -34 - C3 -3G6W 3.1 UPP_SULSO
51 PsiBlast_CBE 64.0435% -47 - C3 -3G6W 3.2 UPP_SULSO