@TOME V2.3
(Mar 2018)

Ref. - - Doc.
Global output mode :
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Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Modeled complexes Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor model: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : spr0666: (2017-12-27 )
MSIIEMRDVVKKYDNGTTALRGVSVSVQPGEFAYIVGPSGAGKSTFIRSLYREVKIDKGSLSVAGFNLVKIKKKDVPLLRRSVGVVFQDYKLLPKKTVYENIAYAMEVIGENRRNIKRRVMEVLDLVGLKHKVRSFPNELSGGEQQRIAIARAIVNNPKVLIADEPTGNLDPDNSWEIMNLLERINLQGTTILMATHNSQIVNTLRHRVIAIENGRVVRDESKGEYGYDD

Atome Classification :

(22 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

AGS_B_6(3C4J)
?
[Raw transfer]



ANP_J_5(3C41)
?
[Raw transfer]



AGS_A_4(3C4J)
?
[Raw transfer]



ATP_A_7(4YMU)
?
[Raw transfer]



ATP_A_6(4YMV)
?
[Raw transfer]



ANP_K_6(3C41)
?
[Raw transfer]



ADP_A_3(4YER)
?
[Raw transfer]



AT4_B_6(2OLK)
?
[Raw transfer]



AT4_D_8(2OLK)
?
[Raw transfer]



ACP_A_4(4AYT)
ABCBA_HUMAN
[Raw transfer]



ADP_A_2(4U00)
?
[Raw transfer]



ACP_A_4(4AYX)
ABCBA_HUMAN
[Raw transfer]



IPA_A_6(3TIF)
Y796_METJA
[Raw transfer]
2 PsiBlast_PDB 79.5438% -6 - C1 -3TUI - METN_ECOLI -
18 PsiBlast_PDB 78.5334%-101 - C1 -2IT1 - ? -
23 PsiBlast_CBE 78.4738% -7 - C1 -3TUZ - METN_ECOLI -
24 PsiBlast_CBE 77.9138% -16 - C1 -3TUI - METN_ECOLI -
3 PsiBlast_PDB 77.6938% -4 - C1 -3TUZ - METN_ECOLI -
16 PsiBlast_PDB 77.1235% 0 - C- -5NIL - ? -
15 PsiBlast_PDB 77.1235% 0 - C- -5NIK - ? -
163 HHSearch 76.9434%-120 * C1 *4YER 6.0 ?
26 PsiBlast_CBE 76.7038% -8 - C1 -3TUI - METN_ECOLI -
4 PsiBlast_PDB 76.5738% -7 - C1 -3TUJ - METN_ECOLI -
51 PsiBlast_CBE 76.3235% -74 - C1 -2YYZ - ? -
44 PsiBlast_CBE 75.3635% -43 - C1 -4YMV 5.1 ?
21 PsiBlast_CBE 75.3338% -15 - C1 -3TUZ - METN_ECOLI -
146 Fugue 75.0537% -14 - C1 -3TUZ - METN_ECOLI -
22 PsiBlast_CBE 75.0038% -10 - C1 -3TUZ - METN_ECOLI -
158 HHSearch 74.5030%-111 - C1 -3FVQ - FBPC_NEIG1 -
157 HHSearch 74.2239% -6 - C1 -3DHW - METN_ECOLI -
7 PsiBlast_PDB 74.0437% -6 - C1 -2OUK - ? -
12 PsiBlast_PDB 73.6241% -48 - C1 -2PCL - LOLD_AQUAE -
19 PsiBlast_PDB 73.4134%-126 - C1 -4TQU - ? -
47 PsiBlast_CBE 67.6234% 37 - C1 -3TIF 3.8 Y796_METJA
102 PsiBlast_CBE 48.6433% -35 - C1 -4AYX 4.0 ABCBA_HUMAN