@TOME V2.3
(Mar 2018)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Modeled complexes Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor model: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : spr0670: (2017-12-27 )
MSFTKFQFKNYIREALKELKFTTPTEVQDKLIPIVLAGRDLVGESKTGSGKTHTFLLPIFQQLDEASDSVQAVITAPSRELATQIYQVARQISAHSDVEVRVVNYVGGTDKARQIEKLESNQPHIVIGTPGRIYDLVKSGDLAIHKAKTFVVDEADMTLDMGFLETVDKIAGSLPKDLQFMVFSATIPQKLQPFLKKYLSNPVMEKIKTKTVISDTIDNWLISTKGHDKNAQIYQLTQLMQPYLAMIFVNTKTRADELHSYLTAQGLKVAKIHGDIAPRERKRIMNQVQNLDFEYIVATDLAARGIDIEGVSHVINDAIPQDLSFFVHRVGRTGRNGLPGTAITLYQPSDDSDIRELEKLGIKFSPKMVKDGEFQDTYDRDRRANREKKQDKLDIEMIGLVKKKKKKVKPGYKKKIQWAVDEKRRKTKRAENRARGRAERKAKRQTF

Atome Classification :

(33 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

ANP_A_3(4D25)
?
[Raw transfer]



ANP_A_3(4D25)
?
[Raw transfer]



ANP_A_3(3I5X)
MS116_YEAST
[Raw transfer]



M2A_A_3(5ELX)
DBP5_YEAST
[Raw transfer]



ADP_A_2(4LJY)
PRP5_YEAST
[Raw transfer]



ANP_A_7(2J0S)
IF4A3_HUMAN
[Raw transfer]



ANP_A_2(5E7M)
DDX3X_HUMAN
[Raw transfer]



ADP_A_4(4PX9)
DDX3X_HUMAN
[Raw transfer]



ADP_B_5(4PX9)
DDX3X_HUMAN
[Raw transfer]



ADP_C_6(4PX9)
DDX3X_HUMAN
[Raw transfer]



AMP_A_3(3BER)
DDX47_HUMAN
[Raw transfer]



ADP_A_2(4PXA)
DDX3X_HUMAN
[Raw transfer]



8OP_C_10(3NBF)
?
[Raw transfer]



AMP_A_2(2I4I)
DDX3X_HUMAN
[Raw transfer]



ADP_A_3(2PL3)
DDX10_HUMAN
[Raw transfer]



8OP_B_6(3MWK)
?
[Raw transfer]



AMP_A_2(2I4I)
DDX3X_HUMAN
[Raw transfer]



8OX_B_6(3MWL)
?
[Raw transfer]



AMP_A_2(5E7J)
DDX3X_HUMAN
[Raw transfer]



8OD_A_5(3NBF)
?
[Raw transfer]



AMP_A_5(2VSO)
IF4A_YEAST
[Raw transfer]



LMR_A_2(5GVR)
DDX41_HUMAN
[Raw transfer]
1 PsiBlast_PDB 85.4036%-107 - C3 -5IVL - ? -
113 HHSearch 84.4436%-107 - C3 -5IVL - ? -
9 PsiBlast_PDB 80.4332% -87 - C3 -5ANR - DDX6_HUMAN -
123 HHSearch 80.0432%-137 - C3 -4CT4 - DDX6_HUMAN -
7 PsiBlast_PDB 79.5532% -85 - C3 -4CT4 - DDX6_HUMAN -
15 PsiBlast_PDB 78.3431% -63 - C3 -3EX7 - IF4A3_HUMAN -
8 PsiBlast_PDB 77.6332% -86 - C3 -4CT5 - DDX6_HUMAN -
124 HHSearch 77.4930%-129 - C3 -1S2M - DHH1_YEAST -
125 HHSearch 75.9332% -98 - C3 -1FUU - IF4A_YEAST -
12 PsiBlast_PDB 75.7931% -59 - C3 -2J0S 7.9 IF4A3_HUMAN
27 PsiBlast_CBE 75.5331% -58 - C3 -2HYI - IF4A3_HUMAN -
24 PsiBlast_CBE 75.3531% -58 - C3 -2J0Q - IF4A3_HUMAN -
26 PsiBlast_CBE 75.3231% -60 - C3 -3EX7 - IF4A3_HUMAN -
45 PsiBlast_CBE 75.1333% -93 - C3 -2VSO - IF4A_YEAST -
25 PsiBlast_CBE 74.9731% -61 - C3 -2XB2 - IF4A3_HUMAN -
43 PsiBlast_CBE 74.8333% -91 - C3 -2VSX - IF4A_YEAST -
11 PsiBlast_PDB 74.6731% -58 - C3 -2J0Q - IF4A3_HUMAN -
44 PsiBlast_CBE 74.6533% -91 - C3 -2VSX - IF4A_YEAST -
14 PsiBlast_PDB 74.5131% -61 - C3 -2HYI - IF4A3_HUMAN -
46 PsiBlast_CBE 74.5033% -92 - C3 -2VSO 5.1 IF4A_YEAST
130 HHSearch 73.4535% 1 - C3 -2I4I 4.5 DDX3X_HUMAN
4 PsiBlast_PDB 72.0134% -5 - C3 -5E7J 6.0 DDX3X_HUMAN
118 HHSearch 71.9133% -5 - C3 -4D25 8.2 ?
19 PsiBlast_PDB 71.5532% -10 - C3 -4D25 8.2 ?
112 HHSearch 70.4431% 5 - C3 -3I5X 9.3 MS116_YEAST
6 PsiBlast_PDB 69.8034% 1 - C3 -2I4I 4.5 DDX3X_HUMAN
5 PsiBlast_PDB 69.3834% -2 - C3 -5E7M 4.8 DDX3X_HUMAN
54 PsiBlast_CBE 51.1538% -43 - C3 -3BER 5.0 DDX47_HUMAN
78 PsiBlast_CBE 49.0232% -33 - C3 -5GVR 2.0 DDX41_HUMAN
65 PsiBlast_CBE 48.1036% -29 - C3 -4PX9 5.7 DDX3X_HUMAN
67 PsiBlast_CBE 48.0936% -29 - C3 -4PX9 5.9 DDX3X_HUMAN
66 PsiBlast_CBE 47.5336% -28 - C3 -4PX9 5.4 DDX3X_HUMAN
73 PsiBlast_CBE 43.6032% -8 - C3 -2PL3 6.2 DDX10_HUMAN