@TOME V2.3
(Mar 2018)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Modeled complexes Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor model: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : spr0671: (2017-12-27 )
MSERKLFTSESVSEGHPDKIADQISDAILDAILAKDPEAHVAAETAVYTGSVHVFGEISTNAYVDINRVVRDTIAEIGYTNTEYGFSAETVGVHPSLVEQSPDIAQGVNEALEVRGNADQDPLDLIGAGDQGLMFGFAVDETEELMPLPIALSHKLVRRLAELRKSGEISYLRPDAKSQVTVEYDENDRPVRVDTVVISTQHDPEATNEQIHQDVIDKVIKEVIPSSYLDDKTKFFINPTGRFVIGGPQGDSGLTGRKIIVDTYGGYSRHGGGAFSGKDATKVDRSASYAARYIAKNIVAAGLAKKAEVQLAYAIGVAQPVSVRIDTFGTGTVAESQLEKAARQIFDLRPAGIIQMLDLKRPIYRQTSAYGHMGRTDIDLPWERLDKVDALKEAVK

Atome Classification :

(38 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

PPK_A_3(5A1I)
METK2_HUMAN
[Raw transfer]




3PO_B_11(5T8S)
METK_NEIG1
[Raw transfer]




PPK_A_5(5A19)
METK2_HUMAN
[Raw transfer]




AMP_B_3(5T8T)
METK_NEIG1
[Raw transfer]




PPK_A_4(5A1G)
METK2_HUMAN
[Raw transfer]




3PO_A_3(4ODJ)
?
[Raw transfer]




3PO_A_3(4ODJ)
?
[Raw transfer]




AMP_A_4(5T8S)
METK_NEIG1
[Raw transfer]




AMP_A_4(5T8S)
METK_NEIG1
[Raw transfer]




ATP_B_9(1O93)
METK1_RAT
[Raw transfer]




S7M_A_6(5A1G)
METK2_HUMAN
[Raw transfer]




ATP_B_9(1O9T)
METK1_RAT
[Raw transfer]




AMB_C_3(1QM4)
METK1_RAT
[Raw transfer]




LIS_A_3(1O90)
METK1_RAT
[Raw transfer]




AMB_C_3(1QM4)
METK1_RAT
[Raw transfer]




ADP_B_9(1O92)
METK1_RAT
[Raw transfer]




UNL_A_5(3S82)
METK_MYCA1
[Raw transfer]




UNL_A_5(3S82)
METK_MYCA1
[Raw transfer]




UNL_A_6(3S82)
METK_MYCA1
[Raw transfer]




25 PsiBlast_CBE 80.6059% -63 - C3 -1P7L - METK_ECOLI -
22 PsiBlast_CBE 80.3059% -63 - C3 -1RG9 - METK_ECOLI -
23 PsiBlast_CBE 79.8359% -63 - C3 -1RG9 - METK_ECOLI -
4 PsiBlast_PDB 79.6659% -61 - C3 -1P7L - METK_ECOLI -
26 PsiBlast_CBE 79.5959% -61 - C3 -1P7L - METK_ECOLI -
5 PsiBlast_PDB 79.4459% -61 - C3 -1RG9 - METK_ECOLI -
82 HHSearch 79.3361% -62 - C3 -1RG9 - METK_ECOLI -
8 PsiBlast_PDB 79.1159% -67 - C3 -1MXC - METK_ECOLI -
27 PsiBlast_CBE 78.9459% -62 - C3 -1P7L - METK_ECOLI -
24 PsiBlast_CBE 78.7459% -61 - C3 -1RG9 - METK_ECOLI -
6 PsiBlast_PDB 78.6159% -64 - C3 -1MXA - METK_ECOLI -
7 PsiBlast_PDB 78.4659% -66 - C3 -1MXB - METK_ECOLI -
10 PsiBlast_PDB 77.6659% -65 - C3 -1XRC - METK_ECOLI -
9 PsiBlast_PDB 77.6459% -63 - C3 -1XRA - METK_ECOLI -
16 PsiBlast_PDB 77.6358% -67 - C3 -1XRB - METK_ECOLI -
74 HHSearch 77.2461% -22 - C3 -5H9U - METK_THET2 -
1 PsiBlast_PDB 76.8761% -25 - C3 -5H9U - METK_THET2 -
3 PsiBlast_PDB 76.2659% -66 - C3 -1FUG - METK_ECOLI -
15 PsiBlast_PDB 76.0560% -58 - C3 -3IML - METK_BURPS -
43 PsiBlast_CBE 75.6956% -31 - C3 -4KTT - METK2_HUMAN -
52 PsiBlast_CBE 75.6456% -28 - C3 -5A1I 3.3 METK2_HUMAN
30 PsiBlast_CBE 75.5460% -14 - C3 -5T8T 4.7 METK_NEIG1
81 HHSearch 75.4561% -7 - C3 -5T8S 4.8 METK_NEIG1
31 PsiBlast_CBE 75.3260% -12 * C3 *5T8S 3.5 METK_NEIG1
53 PsiBlast_CBE 75.1456% -30 - C3 -5A1G 5.0 METK2_HUMAN
13 PsiBlast_PDB 74.7960% -6 - C3 -5T8S 4.8 METK_NEIG1
54 PsiBlast_CBE 73.8856% -30 - C3 -5A19 3.4 METK2_HUMAN
17 PsiBlast_PDB 71.9456% -17 - C3 -1QM4 2.0 METK1_RAT
18 PsiBlast_PDB 71.8756% -17 - C3 -1O90 3.0 METK1_RAT
34 PsiBlast_CBE 71.7856% -15 - C3 -1O9T 3.6 METK1_RAT
20 PsiBlast_PDB 71.7156% -16 - C3 -1O93 3.2 METK1_RAT
79 HHSearch 71.5952% -14 - C3 -4ODJ 2.5 ?
19 PsiBlast_PDB 71.5956% -17 - C3 -1O92 3.4 METK1_RAT
61 PsiBlast_CBE 70.4650% -11 - C3 -4ODJ 2.5 ?
76 HHSearch 68.0360% 4 - C3 -3S82 2.8 METK_MYCA1
75 HHSearch 67.7060% 2 - C3 -3S82 2.8 METK_MYCA1
21 PsiBlast_CBE 64.9159% 32 - C3 -3S82 2.8 METK_MYCA1
68 Fugue 37.3054% 16 - C3 -1QM4 2.0 METK1_RAT