@TOME V2.3
(Mar 2018)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Modeled complexes Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor model: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : spr0692: (2017-12-27 )
MREYDIIAIGGGSGGIATMNRAGEHGAQAAVIEEKKLGGTCVNVGCVPKKIMWYGAQIAETFHQFGEDYGFKTTDLNFDFATLRRNRESYIDRARSSYDGSFKRNGVDLIEGHAEFVDSHTVSVNGELIRAKHIVIATGAHPSIPNIPGAELGGSSDDVFAWEELPESVAILGAGYIAVELAGVLHTFGVKTDLFVRRDRPLRGFDSYIVEGLVKEMERTNLPLHTHKVPVKLEKTTDGITIHFEDGTSHTASQVIWATGRRPNVKGLQLEKAGVTLNERGFIQVDEYQNTVVEGIYALGDVTGEKELTPVAIKAGRTLSERLFNGKTTAKMDYSTIPTVVFSHPAIGTVGLTEEQAIKEYGQDQIKVYKSSFASMYSACTRNRQESRFKLITAGSEEKVVGLHGIGYGVDEMIQGFAVAIKMGATKADFDATVAIHPTSSEEFVTMR

Atome Classification :

(36 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

FAD_A_5(3DK9)
GSHR_HUMAN
[Raw transfer]



FAD_B_4(1GES)
GSHR_ECOLI
[Raw transfer]



FAD_X_2(3DJG)
GSHR_HUMAN
[Raw transfer]



FAD_E_5(1GRF)
GSHR_HUMAN
[Raw transfer]



FAD_A_3(1GER)
GSHR_ECOLI
[Raw transfer]



FAD_C_3(1ONF)
GSHR_PLAFK
[Raw transfer]



FAD_B_10(2R9Z)
GASHR_MARGR
[Raw transfer]



FAD_A_3(4DNA)
?
[Raw transfer]



FAD_B_10(2GH5)
GSHR_HUMAN
[Raw transfer]



FAD_A_3(2R9Z)
GASHR_MARGR
[Raw transfer]



FAD_C_3(2GRT)
GSHR_HUMAN
[Raw transfer]



FAD_B_8(5VDN)
?
[Raw transfer]



FAD_C_3(1ONF)
GSHR_PLAFK
[Raw transfer]



NDP_A_12(3DJJ)
GSHR_HUMAN
[Raw transfer]



NDP_A_4(3DK4)
GSHR_HUMAN
[Raw transfer]



GOL_A_20(3DJJ)
GSHR_HUMAN
[Raw transfer]



GOL_A_9(3DK8)
GSHR_HUMAN
[Raw transfer]



GOL_A_13(3DJJ)
GSHR_HUMAN
[Raw transfer]



2JR_B_9(4NEV)
?
[Raw transfer]



2JR_A_4(4NEV)
?
[Raw transfer]



RDS_B_10(5EBK)
?
[Raw transfer]



RDS_A_4(5EBK)
?
[Raw transfer]



GCG_A_5(4ADW)
?
[Raw transfer]



GCG_B_8(4ADW)
?
[Raw transfer]
128 HHSearch 97.0759% -58 - C1 -5VDN 13.8 ?
111 HHSearch 94.7359% -56 - C1 -1GES 13.8 GSHR_ECOLI
24 PsiBlast_CBE 94.2459% -51 - C1 -5VDN - ? -
23 PsiBlast_CBE 93.7561% -51 - C1 -1GER - GSHR_ECOLI -
2 PsiBlast_PDB 93.3861% -50 - C1 -1GER - GSHR_ECOLI -
4 PsiBlast_PDB 92.9759% -50 - C1 -5VDN - ? -
22 PsiBlast_CBE 92.6861% -51 - C1 -1GET - GSHR_ECOLI -
3 PsiBlast_PDB 91.9461% -53 - C1 -1GET - GSHR_ECOLI -
117 HHSearch 91.9259% -57 - C1 -5V36 - ? -
1 PsiBlast_PDB 90.9959% -51 - C1 -5V36 - ? -
27 PsiBlast_CBE 90.9158% -51 - C1 -5U1O - ? -
29 PsiBlast_CBE 90.4158% -48 - C1 -5U1O - ? -
21 PsiBlast_CBE 89.6559% -52 - C1 -5V36 - ? -
7 PsiBlast_PDB 89.6458% -47 - C1 -5U1O - ? -
28 PsiBlast_CBE 89.1658% -49 - C1 -5U1O - ? -
113 HHSearch 86.4949% -61 - C1 -2R9Z 12.9 GASHR_MARGR
112 HHSearch 85.7349% -61 - C1 -2R9Z 13.5 GASHR_MARGR
30 PsiBlast_CBE 84.6148% -55 - C1 -2R9Z - GASHR_MARGR -
5 PsiBlast_PDB 83.4059% -45 - C1 -1GES - GSHR_ECOLI -
6 PsiBlast_PDB 83.0059% -41 - C1 -1GEU - GSHR_ECOLI -
39 PsiBlast_CBE 80.0449% -11 - C1 -3DJG 13.5 GSHR_HUMAN
38 PsiBlast_CBE 79.8849% -14 - C1 -3DJJ 10.8 GSHR_HUMAN
36 PsiBlast_CBE 79.5949% -14 - C1 -3DK8 3.2 GSHR_HUMAN
37 PsiBlast_CBE 79.2849% -12 - C1 -3DK4 9.8 GSHR_HUMAN
114 HHSearch 78.0451% -7 - C1 -3DK9 13.8 GSHR_HUMAN
41 PsiBlast_CBE 75.8849% -8 - C1 -1GRF 13.6 GSHR_HUMAN
40 PsiBlast_CBE 75.4749% -9 - C1 -2GH5 13.8 GSHR_HUMAN
115 HHSearch 75.1350% -4 - C1 -2GRT 12.5 GSHR_HUMAN
126 HHSearch 73.2244% -40 - C1 -1ONF 9.5 GSHR_PLAFK
102 Fugue 71.2456% 29 - C1 -1GER 12.4 GSHR_ECOLI
42 PsiBlast_CBE 70.3839% -35 - C1 -1ONF 9.5 GSHR_PLAFK
116 HHSearch 67.9039% -14 - C1 -4DNA 11.7 ?
48 PsiBlast_CBE 64.7837% 1 - C1 -4ADW 3.6 ?
49 PsiBlast_CBE 63.5637% 2 - C1 -4ADW 3.6 ?
45 PsiBlast_CBE 62.3837% 1 - C1 -5EBK 3.1 ?
44 PsiBlast_CBE 62.1037% -1 - C1 -5EBK 4.6 ?