@TOME V2.3
(Mar 2018)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Modeled complexes Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor model: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : spr0694: (2017-12-27 )
MKQLISLKNIFRSYRNGDQELQVLKNINLEVNEGEFVAIMGPSGSGKSTLMNTIGMLDTPTSGEYYLEGQEVAGLGEKQLAKVRNQQIGFVFQQFFLLSKLNALQNVELPLIYAGVSSSKRRKLAEEYLDKVELTERSHHLPSELSGGQKQRVAIARALVNNPSIILADEPTGALDTKTGNQIMQLLVDLNKEGKTIIMVTHEPEIAAYAKRQIVIRDGVISSDSAQLGKEEN

Atome Classification :

(36 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

ANP_J_5(3C41)
?
[Raw transfer]



ATP_J_5(4YMU)
?
[Raw transfer]



ATP_B_6(1L2T)
Y796_METJA
[Raw transfer]



ATP_A_7(4YMU)
?
[Raw transfer]



ATP_A_6(4YMV)
?
[Raw transfer]



ATP_J_5(4YMV)
?
[Raw transfer]



AGS_B_6(3C4J)
?
[Raw transfer]



ANP_K_6(3C41)
?
[Raw transfer]



ADP_A_3(1F3O)
Y796_METJA
[Raw transfer]



ATP_A_5(1B0U)
HISP_SALTY
[Raw transfer]



AGS_A_4(3C4J)
?
[Raw transfer]



ADP_B_8(3TIF)
Y796_METJA
[Raw transfer]



AT4_B_6(2OLK)
?
[Raw transfer]



ADP_B_6(2Q0H)
?
[Raw transfer]



ADP_B_6(2OLJ)
?
[Raw transfer]



ADP_A_5(2Q0H)
?
[Raw transfer]



AT4_D_8(2OLK)
?
[Raw transfer]



ADP_A_2(4U00)
?
[Raw transfer]



ADP_A_5(2OLJ)
?
[Raw transfer]



AT4_A_5(2OLK)
?
[Raw transfer]



AT4_C_7(2OLK)
?
[Raw transfer]



LMT_B_4(4MKI)
ECFA2_CALS4
[Raw transfer]



LMT_A_7(4MKI)
ECFA2_CALS4
[Raw transfer]
5 PsiBlast_PDB 85.6252% 0 - C- -5NIL - ? -
4 PsiBlast_PDB 85.6252% 0 - C- -5NIK - ? -
21 PsiBlast_CBE 84.1853% -12 - C1 -1L2T 6.9 Y796_METJA
1 PsiBlast_PDB 83.9253% -9 - C1 -1L2T - Y796_METJA -
22 PsiBlast_CBE 83.8752% -12 - C1 -3TIF 6.4 Y796_METJA
2 PsiBlast_PDB 82.6752% -10 - C1 -3TIF - Y796_METJA -
3 PsiBlast_PDB 79.7253% -8 - C1 -1F3O 5.3 Y796_METJA
143 Fugue 77.4038%-112 - C1 -3TUZ - METN_ECOLI -
166 HHSearch 76.9539%-112 - C1 -3TUI - METN_ECOLI -
145 Fugue 75.8637%-100 - C1 -1OXS - ? -
158 HHSearch 75.2140%-117 - C1 -3DHW - METN_ECOLI -
9 PsiBlast_PDB 74.1042%-134 - C1 -3TUZ - METN_ECOLI -
27 PsiBlast_CBE 70.6542%-128 - C1 -3TUI - METN_ECOLI -
167 HHSearch 70.0635%-107 - C1 -1OXX - ? -
24 PsiBlast_CBE 69.1142%-129 - C1 -3TUZ - METN_ECOLI -
146 Fugue 68.6031% -91 - C1 -1Z47 - ? -
28 PsiBlast_CBE 68.2942%-124 - C1 -3TUI - METN_ECOLI -
30 PsiBlast_CBE 67.5540% -78 - C1 -4YMV 5.5 ?
8 PsiBlast_PDB 67.2142%-123 - C1 -3TUI - METN_ECOLI -
15 PsiBlast_PDB 67.2040% -77 - C1 -4YMV 5.3 ?
14 PsiBlast_PDB 66.8940% -73 - C1 -4YMU 5.8 ?
31 PsiBlast_CBE 64.4340% -76 - C1 -4YMU 6.1 ?
45 PsiBlast_CBE 61.2639% -73 - C1 -2OLK 4.2 ?
44 PsiBlast_CBE 59.0939% -66 - C1 -2OLK 5.3 ?
17 PsiBlast_PDB 58.5940% -65 - C1 -4U00 6.3 ?
46 PsiBlast_CBE 57.6139% -59 - C1 -2OLJ 4.2 ?
35 PsiBlast_CBE 57.6139% -63 - C1 -3C4J 5.3 ?
43 PsiBlast_CBE 57.2439% -68 - C1 -2OLK 5.1 ?
54 PsiBlast_CBE 57.0638% -67 - C1 -3C41 6.1 ?
20 PsiBlast_PDB 57.0539% -66 - C1 -2OLK 6.4 ?
36 PsiBlast_CBE 56.5139% -65 - C1 -3C4J 4.2 ?
38 PsiBlast_CBE 55.5039% -62 - C1 -2Q0H 5.8 ?
19 PsiBlast_PDB 54.7639% -69 - C1 -2OLJ 6.0 ?
55 PsiBlast_CBE 54.5638% -60 - C1 -3C41 7.0 ?
87 PsiBlast_CBE 52.7236% -17 - C1 -1B0U 4.4 HISP_SALTY
37 PsiBlast_CBE 51.0139% -70 - C1 -2Q0H 6.3 ?