@TOME V2.3
(Mar 2018)

Ref. - - Doc.
Global output mode :
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Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Modeled complexes Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor model: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : spr0725: (2017-12-28 )
MLCQNCKINDSTIHLYTNLNGKQKQIDLCQNCYKIIKTDPNNSLFKGMTDLNNRDFDPFGDFFNDLNNFRPSSNTPPIPPTQSGGGYGGNGGYGSQNRGSAQTPPPSQEKGLLEEFGINVTEIARRGDIDPVIGRDDEIIRVIEILNRRTKNNPVLIGEPGVGKTAVVEGLAQKIVDGDVPHKLQGKQVIRLDVVSLVQGTGIRGQFEERMQKLMEEIRKREDIILFIDEIHEIVGAGSASDGNMDAGNILKPALARGELQLVGATTLNEYRIIEKDAALERRMQPVKVDEPTVDETITILKGIQKKYEDYHHVQYTDAAIEAAATLSNRYIQDRFLPDKAIDLLDEAGSKMNLTLNFVDPKVIDQRLIEAENLKSQATREEDFEKAAYFRDQIAKYKEMQKKKITDQDTPIISEKTIEHIIEQKTNIPVGDLKEKEQSQLIHLAEDLKSHVIGQDDAVDKIAKAIRRNRVGLGTPNRPIGSFLFVGPTGVGKTELSKQLAIELFGSADSMIRFDMSEYMEKHSVAKLVGAPPGYVGYDEAGQLTEKVRHNPYSLILLDEVEKAHPDVMHMFLQVLDDGRLTDGQGRTVSFKDAIIIMTSNAGTGKTEASVGFGAAREGRTNSVLGELGNFFSPEFMNRFDGIIEFKALSKDNLLQIVELMLADVNKRLSSNNIRLDVTDKVKEKLVDLGYDPKMGARPLRRTIQDYIEDTITDYYLENPSEKDLKAVMTSKGNIQIKSAKKAEVKSSEKEK

Atome Classification :

(22 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

ACP_A_2(4LJA)

[Raw transfer]



ACP_A_2(4LJ9)

[Raw transfer]



ACP_A_2(4LJ9)

[Raw transfer]



MNT_A_4(4LJ7)
CLPB_THET8
[Raw transfer]



MNT_C_8(4LJ7)

[Raw transfer]



ADP_A_4(4FCV)
CLPB_THET8
[Raw transfer]



MNT_B_6(4LJ7)
CLPB_THET8
[Raw transfer]



ADP_A_2(4LJ5)

[Raw transfer]



ADP_A_4(4FCV)
CLPB_THET8
[Raw transfer]



ADP_A_4(4FD2)
CLPB_THET8
[Raw transfer]



ADP_A_4(4FCW)
CLPB_THET8
[Raw transfer]



ADP_D_6(4FD2)

[Raw transfer]



ADP_B_5(4FD2)
CLPB_THET8
[Raw transfer]
147 Fugue 98.5943% 0 - C- -1QVR - CLPB_THET8 -
120 HHSearch 70.2052% - - C1 -3PXI - CLPC_BACSU -
119 HHSearch 69.2952% 20 - C1 -3J3U - CLPC_BACSU -
4 PsiBlast_PDB 69.1852% 31 - C1 -3J3U - CLPC_BACSU -
3 PsiBlast_PDB 67.1752% 30 - C1 -3J3R - CLPC_BACSU -
1 PsiBlast_PDB 65.8552% 34 - C1 -3J3S - CLPC_BACSU -
2 PsiBlast_PDB 65.4352% 30 - C1 -3J3T - CLPC_BACSU -
118 HHSearch 60.0546% 4 - C1 -5D4W - ? -
24 PsiBlast_CBE 58.6553%-145 - C1 -4FD2 6.3 CLPB_THET8
21 PsiBlast_CBE 58.4551%-143 - C1 -4LJ7 8.3
12 PsiBlast_PDB 58.3653%-143 - C1 -4FD2 6.5 CLPB_THET8
22 PsiBlast_CBE 58.2251%-137 - C1 -4LJ7 7.0 CLPB_THET8
7 PsiBlast_PDB 58.0652%-124 - C1 -4LJ5 6.6
6 PsiBlast_PDB 57.6252%-125 - C1 -4LJ4 - -
14 PsiBlast_PDB 57.5852%-141 - C1 -4FCW 7.6 CLPB_THET8
23 PsiBlast_CBE 57.5653%-142 - C1 -4FD2 6.0
8 PsiBlast_PDB 57.0151%-133 - C1 -4LJ7 9.3 CLPB_THET8
13 PsiBlast_PDB 56.8552%-135 - C1 -4FCV 6.7 CLPB_THET8
9 PsiBlast_PDB 56.6151%-110 - C1 -4LJ9 6.7
10 PsiBlast_PDB 56.5451%-121 - C1 -4LJA 7.2
124 HHSearch 52.1053% -48 * C1 *4FCV 6.7 CLPB_THET8
123 HHSearch 50.0051% -30 - C1 -4LJ9 6.7