@TOME V2.3
(Mar 2018)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Modeled complexes Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor model: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : spr0729: (2017-12-28 )
MTQIIDGKALAAKLQGQLAEKTAKLKEETALVPGLVVILVGDNPASQVYVRNKERSALAAGSRSEVVRVPETITQEELLDLIAKYNQDPAWHGILVQLPLPKHIDEEAVLLAIDPEKDVDGFHPLNMGRLWSGHPVMIPSTPAGIMEMFHEYGIDLEGKNAVVIGRSNIVGKPMAQLLLAKNATVTLTHSRTHNLAKVAAKADILVVAIGRAKFVTADFVKPGAVVIDVGMNRDENGKLCGDVDYEAVAPLASHITPVPGGVGPMTITMLMEQTYQAALRTLDRK

Atome Classification :

(31 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

L34_A_6(4B4V)
?
[Raw transfer]



9L9_A_6(4B4W)
?
[Raw transfer]



L34_B_9(4B4V)
?
[Raw transfer]



9L9_B_7(4CJX)
?
[Raw transfer]



9L9_B_7(4CJX)
?
[Raw transfer]



9L9_B_9(4B4W)
?
[Raw transfer]



9L9_A_5(4CJX)
?
[Raw transfer]



L34_A_3(5TC4)
MTDC_HUMAN
[Raw transfer]



NAP_D_4(1DIB)
C1TC_HUMAN
[Raw transfer]



NDP_C_3(1A4I)
C1TC_HUMAN
[Raw transfer]



NAP_A_3(1DIA)
C1TC_HUMAN
[Raw transfer]



NDP_C_3(1A4I)
C1TC_HUMAN
[Raw transfer]



NDP_D_4(1A4I)
C1TC_HUMAN
[Raw transfer]



NDP_D_4(1A4I)
C1TC_HUMAN
[Raw transfer]



L37_A_6(1DIG)
C1TC_HUMAN
[Raw transfer]



L24_A_5(1DIA)
C1TC_HUMAN
[Raw transfer]



NAD_A_2(5TC4)
MTDC_HUMAN
[Raw transfer]



NAD_B_5(3P2O)
FOLD_CAMJE
[Raw transfer]



NAP_C_3(1DIB)
C1TC_HUMAN
[Raw transfer]



NAD_A_2(5TC4)
MTDC_HUMAN
[Raw transfer]



NAP_A_4(1DIG)
C1TC_HUMAN
[Raw transfer]



NAD_A_3(3P2O)
FOLD_CAMJE
[Raw transfer]



NAD_A_3(3P2O)
FOLD_CAMJE
[Raw transfer]



EDO_B_14(4B4U)
?
[Raw transfer]



EDO_B_14(4B4U)
?
[Raw transfer]



EDO_A_7(4B4U)
?
[Raw transfer]



NAP_B_7(4B4W)
?
[Raw transfer]



NAP_A_3(4B4V)
?
[Raw transfer]



IMD_A_4(3L07)
FOLD_FRATT
[Raw transfer]



IMD_B_7(3L07)
FOLD_FRATT
[Raw transfer]



IMD_B_7(3L07)
FOLD_FRATT
[Raw transfer]
32 HHSearch 93.3046%-126 - C5 -4B4U 3.0 ?
33 HHSearch 93.0550%-123 - C5 -1B0A - FOLD_ECOLI -
3 PsiBlast_PDB 93.0350%-124 - C5 -1B0A - FOLD_ECOLI -
42 HHSearch 92.8451%-127 - C5 -4A5O - FOLD_PSEAE -
2 PsiBlast_PDB 91.3451%-110 - C5 -4A5O - FOLD_PSEAE -
24 PsiBlast_CBE 90.5846%-113 - C5 -4B4U 3.0 ?
6 PsiBlast_PDB 90.4646%-118 - C5 -4B4V 6.2 ?
23 PsiBlast_CBE 89.9546%-114 - C5 -4B4V 5.5 ?
22 PsiBlast_CBE 89.7946%-113 - C5 -4B4W 5.9 ?
5 PsiBlast_PDB 89.6846%-113 - C5 -4B4U 2.7 ?
47 HHSearch 89.1150% -65 - C5 -3P2O 7.5 FOLD_CAMJE
4 PsiBlast_PDB 88.4549% -73 - C5 -3P2O 7.7 FOLD_CAMJE
46 HHSearch 88.2850% -63 - C5 -3P2O 6.0 FOLD_CAMJE
7 PsiBlast_PDB 88.1546%-112 - C5 -4B4W 5.2 ?
15 PsiBlast_PDB 87.0945% -74 - C5 -5TC4 7.0 MTDC_HUMAN
35 HHSearch 87.0552% -73 - C5 -3L07 3.7 FOLD_FRATT
34 HHSearch 86.9948% -73 - C5 -5TC4 7.0 MTDC_HUMAN
1 PsiBlast_PDB 86.2752% -67 - C5 -3L07 3.9 FOLD_FRATT
21 PsiBlast_CBE 86.2052% -70 - C5 -3L07 3.7 FOLD_FRATT
13 PsiBlast_PDB 81.2644% -80 - C5 -2C2X - FOLD_MYCTU -
37 HHSearch 77.7644% -10 - C5 -1A4I 9.7 C1TC_HUMAN
10 PsiBlast_PDB 77.5143% -15 - C5 -1DIB 9.2 C1TC_HUMAN
8 PsiBlast_PDB 77.4043% -17 - C5 -1A4I 10.2 C1TC_HUMAN
36 HHSearch 77.3944% -6 * C5 *1A4I 10.2 C1TC_HUMAN
9 PsiBlast_PDB 76.8843% -14 - C5 -1DIA 7.8 C1TC_HUMAN
11 PsiBlast_PDB 76.4743% -16 - C5 -1DIG 9.0 C1TC_HUMAN
41 HHSearch 76.0341% -18 - C5 -4CJX 6.2 ?
25 PsiBlast_CBE 75.6143% -0 - C5 -1A4I 9.7 C1TC_HUMAN
27 PsiBlast_CBE 75.6043% -1 - C5 -1DIB 9.1 C1TC_HUMAN
16 PsiBlast_PDB 73.2939% -7 - C5 -4CJX 6.4 ?
30 PsiBlast_CBE 73.2439% -11 - C5 -4CJX 6.2 ?