@TOME V2.3
(Mar 2018)

Ref. - - Doc.
Global output mode :
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Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Modeled complexes Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor model: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : spr0730: (2017-12-28 )
MKVINQTLLEKVIIERSRSSHKGDYGRLLLLGGTYPYGGAIIMAALAAVKNGAGLVTVGTDRENIPALHSHLPEAMAFALQDKQLLKEQLEKAEVVLLGPGLGDNAFGEDLVKQVFAGLKQNQILIVDGGALTILARTSLSFPSSQLILTPHQKEWEKLSGITIEKQKEDTTASALTSFPKGTILVEKGPATRVWQAGQSDYYQLQVGGPYQATGGMGDTLAGMIAGFVGQFRQASLYERVAVATHLHSAIAQELSQENYVVLPTEISRYLPKIMKIICQQERVSKDKLV

Atome Classification :

(20 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

APR_A_3(3RQ6)
NNRD_BACSU
[Raw transfer]



B6P_A_3(3RQH)
NNRD_BACSU
[Raw transfer]



BA3_A_3(3RQQ)
NNRD_BACSU
[Raw transfer]



EDO_A_9(2R3B)
NNRD_ENTFA
[Raw transfer]



EDO_A_9(2R3B)
NNRD_ENTFA
[Raw transfer]



EDO_A_9(2R3B)
NNRD_ENTFA
[Raw transfer]



EDO_B_11(2R3B)
NNRD_ENTFA
[Raw transfer]
1 PsiBlast_PDB 94.0053% -91 - C4 -3BGK - ? -
49 HHSearch 90.3441% -93 - C4 -2R3B 2.2 NNRD_ENTFA
3 PsiBlast_PDB 90.2940% -92 - C4 -2R3E - NNRD_ENTFA -
2 PsiBlast_PDB 90.2740% -92 - C4 -2R3B 2.2 NNRD_ENTFA
48 HHSearch 89.9641% -93 - C4 -2R3B 3.2 NNRD_ENTFA
45 HHSearch 89.4854% -73 - C4 -3BGK - ? -
46 HHSearch 75.6330% -54 * C4 *3RPZ - NNRD_BACSU -
47 HHSearch 75.3930% -54 - C4 -3RQH - NNRD_BACSU -
28 PsiBlast_CBE 75.0031% -54 - C4 -3RPH - NNRD_BACSU -
25 PsiBlast_CBE 74.8831% -54 - C4 -3RQ6 7.0 NNRD_BACSU
22 PsiBlast_CBE 74.7531% -54 - C4 -3RQQ 6.8 NNRD_BACSU
26 PsiBlast_CBE 73.9931% -52 - C4 -3RQ2 - NNRD_BACSU -
35 Fugue 73.8539% 20 - C4 -2R3B 2.2 NNRD_ENTFA
21 PsiBlast_CBE 73.7431% -54 - C4 -3RQX - NNRD_BACSU -
27 PsiBlast_CBE 73.3931% -52 - C4 -3RPZ - NNRD_BACSU -
23 PsiBlast_CBE 73.3331% -51 - C4 -3RQH 6.2 NNRD_BACSU
24 PsiBlast_CBE 73.0231% -54 - C4 -3RQ8 - NNRD_BACSU -
11 PsiBlast_PDB 69.6928% -22 - C4 -3RTA - NNR_THEMA -
4 PsiBlast_PDB 69.6528% -21 - C4 -3RS8 - NNR_THEMA -
13 PsiBlast_PDB 69.6228% -23 - C4 -3RTD - NNR_THEMA -