@TOME V2.3
(Mar 2018)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Modeled complexes Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor model: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : spr0744: (2017-12-28 )
MRAVDLIQKKRDGQELTSSEIEWLVEGYVSGTVPDYQMSAFAMAVYFKGMTTREISDLTMNMVKTGQEFDLSAIDGVKVNKHSTGGVGDKVTLILVPLVASFGVPVAKMSGRGLGHTGGTIDKLESIKGYQVERSQEDFIRQVQDIGVSVIGQSDQLVKADKLLYALRDVTATVDTIPLIASSVMSKKIAAGADAILLDVTVGEGAFMKTVDEARELAQTMVDLGKVVGRKTVAVITDMSQPLGRAIGNRLEILEALEILQGQGRQDITHFICELAQIMLGLANVNKTVEEVRQHLENGQALAKFEEMVQAQGGDLEDLYRPVNVAHVVEIPAQETGVISALPAMDFGLYAMRLGAGRAVKSDALDYETGIVFEKKIGDSVQKGEIVAKVYTNEKIPPQLVTDFQKCVKISDEVKKIREIVEIIS

Atome Classification :

(27 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

URA_B_7(1BRW)
PDP_GEOSE
[Raw transfer]



CMU_A_2(1UOU)
TYPH_HUMAN
[Raw transfer]



CMU_A_2(1UOU)
TYPH_HUMAN
[Raw transfer]



IUR_A_3(2WK6)
TYPH_HUMAN
[Raw transfer]



URI_B_6(4YYY)
TYPH_SALTY
[Raw transfer]



IUR_B_4(2WK6)
TYPH_HUMAN
[Raw transfer]



THM_B_20(4YEK)
TYPH_SALTY
[Raw transfer]



THM_A_2(3H5Q)
PDP_STAAC
[Raw transfer]



THM_A_2(3H5Q)
PDP_STAAC
[Raw transfer]



AZZ_A_11(4LHM)
TYPH_ECOLI
[Raw transfer]



THM_A_9(4YEK)
TYPH_SALTY
[Raw transfer]



0NP_A_2(4EAD)
TYPH_ECOLI
[Raw transfer]



0NP_A_2(4EAD)
TYPH_ECOLI
[Raw transfer]



CIT_A_4(4YYY)
TYPH_SALTY
[Raw transfer]



CIT_B_8(4YYY)
TYPH_SALTY
[Raw transfer]



EDO_A_5(4X46)
TYPH_SALTY
[Raw transfer]
21 PsiBlast_CBE 96.0859% -61 - C5 -1BRW - PDP_GEOSE -
36 HHSearch 95.4455% -47 - C5 -1BRW - PDP_GEOSE -
1 PsiBlast_PDB 93.3359% -60 - C5 -1BRW 3.2 PDP_GEOSE
3 PsiBlast_PDB 90.2448% -43 - C5 -3H5Q 3.9 PDP_STAAC
2 PsiBlast_PDB 88.7353% -37 - C5 -5EP8 - PDP_BACSU -
38 HHSearch 86.7843% -37 - C5 -2DSJ - ? -
4 PsiBlast_PDB 86.6542% -40 - C5 -2DSJ - ? -
37 HHSearch 81.4351% -1 - C5 -3H5Q 3.9 PDP_STAAC
32 PsiBlast_CBE 78.2738% -64 - C5 -2WK5 - TYPH_HUMAN -
39 HHSearch 74.9637% -17 - C5 -1UOU 5.6 TYPH_HUMAN
35 HHSearch 72.4237% -12 - C5 -2WK5 - TYPH_HUMAN -
20 PsiBlast_PDB 70.9938% -21 - C5 -1UOU 5.6 TYPH_HUMAN
17 PsiBlast_PDB 70.4638% -13 - C5 -2J0F - TYPH_HUMAN -
19 PsiBlast_PDB 69.3638% -11 - C5 -2WK6 3.9 TYPH_HUMAN
31 PsiBlast_CBE 69.2838% -11 - C5 -2WK6 3.7 TYPH_HUMAN
30 PsiBlast_CBE 69.1438% -13 - C5 -2J0F - TYPH_HUMAN -
29 PsiBlast_CBE 69.0538% -13 - C5 -2J0F - TYPH_HUMAN -
41 HHSearch 68.3830% -20 * C5 *4GA5 - AMPPA_THEKO -
18 PsiBlast_PDB 68.2838% -11 - C5 -2WK5 - TYPH_HUMAN -
16 PsiBlast_PDB 66.9538% 3 - C5 -4LHM 5.0 TYPH_ECOLI
14 PsiBlast_PDB 66.5938% 4 - C5 -4EAD 4.6 TYPH_ECOLI
24 PsiBlast_CBE 65.9639% 4 - C5 -4YYY 3.4 TYPH_SALTY
7 PsiBlast_PDB 65.7039% 2 - C5 -4YEK 4.0 TYPH_SALTY
8 PsiBlast_PDB 65.6039% 0 - C5 -4YYY 3.2 TYPH_SALTY
25 PsiBlast_CBE 63.8139% 5 - C5 -4YEK 3.8 TYPH_SALTY
5 PsiBlast_PDB 63.4839% 7 - C5 -4X46 2.8 TYPH_SALTY
40 HHSearch 62.7836% 15 - C5 -4EAD 4.6 TYPH_ECOLI