@TOME V2.3
(Mar 2018)

Ref. - - Doc.
Global output mode :
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Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Modeled complexes Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor model: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : spr0776: (2017-12-29 )
MKKIFLTLLTVSLLGGVSTAVAQDFTIAAKHAIAVEANTGKILYEKDATQPVEIASITKLITVYLVYEALENGSITLSTPVDISDYPYQLTTNSEASNIPMEARNYTVEELLEATLVSSANSAAIALAEKIAGSEKDFVDMMRAKLLEWGIQDATVVNTTGLNNETLGDNIYPGSKKDEENKLSAYDVAIVARNLIKKYPQVLEITKKPSSTFAGMTITSTNYMLEGMPAYRGGFDGLKTGTTDKAGESFVGTTVEKGMRVITVVLNADHQDNNPYARFTATSSLMDYISSTFTLRKIVQQGDAYQDSKAPVQDGKEDTVIAVAPEDIYLIERVGNQSSQSVQFTPDSKAIPAPLEAGTVVGHLTYEDKDLIGQGYITTERPSFEMVADKKIEKAFFLKVWWNQFVRFVNEKL

Atome Classification :

(20 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

UNL_I_9(1TVF)
?
[Raw transfer]



UNL_H_8(1TVF)
?
[Raw transfer]



CIT_A_3(3MFD)
DACB_BACSU
[Raw transfer]



OK3_A_2(5J8X)
DACA_ECOLI
[Raw transfer]



SIN_B_5(4K91)
?
[Raw transfer]



SIN_A_3(4K91)
?
[Raw transfer]



EDO_B_11(3MFD)
DACB_BACSU
[Raw transfer]
1 PsiBlast_PDB 84.1697% -77 - C1 -1XP4 - ? -
34 HHSearch 81.5899% -3 - C1 -1XP4 - ? -
15 PsiBlast_PDB 56.6025% 14 - C1 -3MZF - DACA_ECOLI -
46 Fugue 56.3825% -82 - C1 -1HD8 - DACA_ECOLI -
6 PsiBlast_PDB 56.2328% -62 - C1 -4K91 3.3 ?
8 PsiBlast_PDB 55.2325% 16 - C1 -1NZO - DACA_ECOLI -
10 PsiBlast_PDB 55.0925% 17 - C1 -1Z6F - DACA_ECOLI -
18 PsiBlast_PDB 55.0825% 10 - C1 -1NJ4 - DACA_ECOLI -
33 HHSearch 55.0230% -13 - C1 -4K91 2.7 ?
26 HHSearch 55.0125% 13 - C1 -3MZF - DACA_ECOLI -
11 PsiBlast_PDB 55.0025% 15 - C1 -3BEB - DACA_ECOLI -
14 PsiBlast_PDB 54.9325% 15 - C1 -3MZE - DACA_ECOLI -
29 HHSearch 54.9026% -3 - C1 -3A3J - DACA_HAEIN -
13 PsiBlast_PDB 54.6625% 17 - C1 -3MZD - DACA_ECOLI -
12 PsiBlast_PDB 54.6225% 16 - C1 -3BEC - DACA_ECOLI -
9 PsiBlast_PDB 54.5825% 9 - C1 -1NZU - DACA_ECOLI -
16 PsiBlast_PDB 54.1125% 10 - C1 -5J8X 4.6 DACA_ECOLI
17 PsiBlast_PDB 54.0325% 13 - C1 -1HD8 - DACA_ECOLI -
28 HHSearch 53.9325% 8 - C1 -3ITB - DACC_ECOLI -
27 HHSearch 53.5425% 10 - C1 -3ITB - DACC_ECOLI -