@TOME V2.3
(Mar 2018)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Modeled complexes Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor model: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : spr0819: (2017-12-30 )
MDLWFSEVHTPDVKLSLRTAKQLYAGKSEWQDIEVLDTPAFGKILILNGHVLFSDADDFVYNEMTVHVPMAVHPNPKKVLVIGGGDGGVAQVLTLYPELEQIDIVEPDEMLVEVCREYFPDFAAGLDDPRVTIYYQNGLRFLRNCEDDYDIIINDATDPFGHTEGLFTKEFYGNSYRALKEDGIMIYQHGSPFFDEDESACRSMHRKVNQAFPISRVYQAHIPTSPAGYWLFGFASKKYHPVKDFDKEGWKKRQLFTEYYTANLHVGAFMLPKYVEDILEEEEGKK

Atome Classification :

(20 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

AG3_A_9(2E5W)
SPEE_PYRHO
[Raw transfer]




AG3_C_10(2E5W)
SPEE_PYRHO
[Raw transfer]




SPD_A_3(2O07)
SPEE_HUMAN
[Raw transfer]




MTA_C_12(2E5W)
SPEE_PYRHO
[Raw transfer]




112 HHSearch 89.5640% -99 - C1 -1IY9 - SPEE_BACSU -
3 PsiBlast_PDB 88.0539% -99 - C1 -1IY9 - SPEE_BACSU -
2 PsiBlast_PDB 81.2339% -27 - C1 -1INL - SPEE_THEMA -
116 HHSearch 81.0533% -67 - C1 -1UIR - SPEE_THET8 -
89 PsiBlast_CBE 80.9833% -67 - C1 -3ANX - SPEE_THET8 -
111 HHSearch 80.6439% 8 - C1 -1JQ3 - SPEE_THEMA -
1 PsiBlast_PDB 79.5639% 7 - C1 -1JQ3 - SPEE_THEMA -
21 PsiBlast_CBE 78.7939% 3 - C1 -1JQ3 - SPEE_THEMA -
98 Fugue 78.0538% 3 - C1 -1INL - SPEE_THEMA -
88 PsiBlast_CBE 78.0533% -65 - C1 -3ANX - SPEE_THET8 -
119 HHSearch 77.9932%-106 - C1 -2B2C - ? -
110 HHSearch 77.8239% -27 - C1 -1INL - SPEE_THEMA -
22 PsiBlast_CBE 77.2039% 5 - C1 -1JQ3 - SPEE_THEMA -
117 HHSearch 77.1933% -57 - C1 -3ANX - SPEE_THET8 -
97 Fugue 76.6138% 10 - C1 -1INL - SPEE_THEMA -
122 HHSearch 76.3734% -69 - C1 -3O4F - SPEE_ECOLI -
87 PsiBlast_CBE 75.1432% -12 - C1 -4YUV - ? -
6 PsiBlast_PDB 75.0235% -79 - C1 -3O4F - SPEE_ECOLI -
29 PsiBlast_CBE 74.7332% 20 - C1 -2O06 - SPEE_HUMAN -
77 PsiBlast_CBE 74.0332% -16 - C1 -4YUZ - ? -