@TOME V2.3
(Mar 2018)

Ref. - - Doc.
Global output mode :
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Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Modeled complexes Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor model: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : spr0831: (2017-12-30 )
MKKKLTSLALVGAFLGLSWYGNVQAQESSGNKIHFINVQEGGSDAIILESNGHFAMVDTGEDYDFPDGSDSRYPWREGIETSYKHVLTDRVFRRLKELSVQKLDFILVTHTHSDHIGNVDELLSTYPVDRVYLKKYSDSRITNSERLWDNLYGYDKVLQTATETGVSVIQNITQGDAHFQFGDMDIQLYNYENETDSSGELKKIWDDNSNSLISVVKVNGKKIYLGGDLDNVHGAEDKYGPLIGKVDLMKFNHHHDTNKSNTKDFIKNLSPSLIVQTSDSLPWKNGVDSEYVNWLKERGIERINAASKDYDATVFDIRKDGFVNISTSYKPIPSFQAGWHKSAYGNWWYQAPDSTGEYAVGWNEIEGEWYYFNQTGILLQNQWKKWNNHWFYLTDSGASAKNWKKIDGIWYYFNKENQMEIGWVQDKEQWYYLDVDGSMKTGWLQYMGQWYYFAPSGEMKMGWVKDKETWYYMDSTGVMKTGEIEVAGQHYYLEDSGAMKQGWHKKANDWYFYKTDGSRAVGWIKDKDKWYFLKENGQLLVNGKTPEGYTVDSSGAWLVDVSIEKSATIKTTSHSEIKESKEVVKKDLENKETSQHESVTNFSTSQDLTSSTSQSSETSVNKSESEQ

Atome Classification :

(22 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

OIN_A_3(2X8P)
?
[Raw transfer]



OIN_A_7(2X8O)
?
[Raw transfer]



GOL_A_6(2WWD)
?
[Raw transfer]



GOL_A_11(2X8O)
?
[Raw transfer]



BTB_A_7(2BIB)
?
[Raw transfer]



BTB_A_7(2BIB)
?
[Raw transfer]



P6G_B_10(2BML)

[Raw transfer]



TPT_A_3(1HCX)
ALYS_STRPN
[Raw transfer]
59 Fugue 79.08100% -51 * C1 *2BIB - ? -
39 HHSearch 78.75100% -52 - C2 -2BIB 2.4 ?
1 PsiBlast_PDB 78.70100% -51 - C2 -2BIB 2.4 ?
2 PsiBlast_PDB 52.08100% -46 - C1 -1WRA - ? -
21 PsiBlast_CBE 51.83100% -42 - C1 -1WRA - ? -
40 HHSearch 50.76100% -44 - C1 -1WRA - ? -
34 PsiBlast_CBE 39.7855%-395 - C1 -3ADR - MBLFP_SULTO -
33 PsiBlast_CBE 39.2255%-377 - C1 -3ADR - MBLFP_SULTO -
43 HHSearch 31.6825% 0 - C2 -4NP4 - TOXB_CLODI -
6 PsiBlast_PDB 29.4739% 23 - C2 -2X8M - ? -
8 PsiBlast_PDB 28.7839% 22 - C2 -2X8P 3.3 ?
4 PsiBlast_PDB 28.4639% 24 - C2 -2V04 - ? -
55 HHSearch 28.4340% 7 - C2 -2V05 - ? -
54 HHSearch 28.1840% 44 - C2 -2X8O - ? -
42 HHSearch 27.6731% -6 - C2 -2BIB - ? -
7 PsiBlast_PDB 27.6139% 28 - C2 -2X8O 3.9 ?
45 HHSearch 27.4022% -6 - C2 -4NP4 - TOXB_CLODI -
3 PsiBlast_PDB 26.7239% 57 - C2 -2VYU - ? -
5 PsiBlast_PDB 25.7939% 33 - C2 -2V05 - ? -
52 HHSearch 25.4223% 34 - C2 -2WW5 - ? -
29 PsiBlast_CBE 19.4441% 0 - C2 -2BML 1.5
18 PsiBlast_PDB 19.2141% 1 - C2 -1HCX 6.0 ALYS_STRPN