@TOME V2.3
(Mar 2018)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Modeled complexes Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor model: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : spr0872: (2017-12-31 )
MPELPEVETVCRGLEKLIIGKKISSIEIRYPKMIKTDLEEFQRELPSQIIESMGRRGKYLLFYLTDKVLISHLRMEGKYFYYPDQGPERKHAHVFFHFEDGGTLVYEDVRKFGTMELLVPDLLDAYFISKKLGPEPSEQDFDLQVFQAALAKSKKPIKSHLLDQTLVAGLGNIYVDEVLWRAQVHPARPSQTLTAEEATAIHDQTIAVLGQAVEKGGSTIRTYTNAFGEDGSMQDFHQVYDKTGQECVRCGTIIEKIQLGGRGTHFCPNCQRRD

Atome Classification :

(66 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

NACID_C_3(4PDG)
FPG_LACLC
[Raw transfer]

-

NACID_C_2(1XC8)
FPG_LACLC
[Raw transfer]

-

NACID_C_3(2XZF)
FPG_LACLC
[Raw transfer]

-

NACID_E_2(1PJI)
FPG_LACLC
[Raw transfer]

-

NACID_B_2(3GQ4)
?
[Raw transfer]

-

NACID_C_3(4PD2)
FPG_LACLC
[Raw transfer]

-

NACID_E_2(1PJJ)
FPG_LACLC
[Raw transfer]

-

NACID_E_2(1NNJ)
FPG_LACLC
[Raw transfer]

-

NACID_C_2(1TDZ)
FPG_LACLC
[Raw transfer]

-

NACID_E_2(1PJJ)
FPG_LACLC
[Raw transfer]

-

NACID_C_3(4PD2)
FPG_LACLC
[Raw transfer]

-

NACID_C_3(2XZU)
FPG_LACLC
[Raw transfer]

-

NACID_C_3(4G4R)
?
[Raw transfer]

-

NACID_C_1(3C58)
FPG_LACLC
[Raw transfer]

-

BU3_A_6(4CIS)
?
[Raw transfer]




NACID_C_2(1L2B)
?
[Raw transfer]

-

NACID_E_2(1KFV)
FPG_LACLC
[Raw transfer]

-

NACID_C_3(3GP1)
?
[Raw transfer]

-

NACID_C_3(4PDI)
FPG_LACLC
[Raw transfer]

-

NACID_C_2(1R2Y)
?
[Raw transfer]

-

NACID_C_2(2F5S)
?
[Raw transfer]

-

NACID_C_2(1L2C)
?
[Raw transfer]

-

NACID_C_3(3GQ3)
?
[Raw transfer]

-

GOL_A_6(1PJI)
FPG_LACLC
[Raw transfer]




NACID_C_2(1L2D)
?
[Raw transfer]

-

NACID_C_2(1R2Y)
?
[Raw transfer]

-

NACID_C_3(3GPY)
?
[Raw transfer]

-

NACID_D_3(3SAR)
?
[Raw transfer]

-

NACID_C_2(1R2Z)
?
[Raw transfer]

-

NACID_E_2(1PM5)
FPG_LACLC
[Raw transfer]

-

NACID_C_2(1L1T)
?
[Raw transfer]

-

NACID_C_3(4PCZ)
FPG_LACLC
[Raw transfer]

-

NACID_C_2(1L1Z)
?
[Raw transfer]

-

NACID_B_2(3JR4)
?
[Raw transfer]

-

NACID_C_3(3SAS)
?
[Raw transfer]

-

NACID_B_2(3U6M)
?
[Raw transfer]

-

GOL_A_2(3TWL)
FPG_ARATH
[Raw transfer]




NACID_C_3(3GPU)
?
[Raw transfer]

-

NACID_C_3(3SAT)
?
[Raw transfer]

-

NACID_C_3(3U6P)
?
[Raw transfer]

-

NACID_C_3(3GQ5)
?
[Raw transfer]

-

NACID_C_2(2F5N)
?
[Raw transfer]

-

NACID_C_3(3U6P)
?
[Raw transfer]

-

NACID_D_1(1NNJ)
FPG_LACLC
[Raw transfer]

-

NACID_C_3(4G4O)
?
[Raw transfer]

-

NACID_C_3(4G4Q)
?
[Raw transfer]

-

NACID_B_2(3GPP)
?
[Raw transfer]

-

NACID_C_3(3U6Q)
?
[Raw transfer]

-

NACID_C_3(3U6E)
?
[Raw transfer]

-

NACID_C_3(4G4N)
?
[Raw transfer]

-

NACID_C_3(3U6S)
?
[Raw transfer]

-

NACID_C_3(3U6L)
?
[Raw transfer]

-

NACID_B_2(4PCZ)
FPG_LACLC
[Raw transfer]

-

GOL_D_8(3SAR)
?
[Raw transfer]




NACID_D_2(2F5P)
?
[Raw transfer]

-

NACID_B_1(2F5O)
?
[Raw transfer]

-

NACID_C_3(3GPX)
?
[Raw transfer]

-

NACID_C_3(3JR5)
?
[Raw transfer]

-

NACID_C_3(3SBJ)
?
[Raw transfer]

-

NACID_D_3(3SAV)
?
[Raw transfer]

-

NACID_B_1(2F5Q)
?
[Raw transfer]

-

NACID_C_3(3SAW)
?
[Raw transfer]

-

NACID_C_3(3SAU)
?
[Raw transfer]

-

NACID_C_3(3U6C)
?
[Raw transfer]

-

NACID_C_3(3U6D)
?
[Raw transfer]

-

NACID_C_3(3GO8)
?
[Raw transfer]

-

NACID_C_3(3U6O)
?
[Raw transfer]

-

GOL_A_3(3TWK)
FPG_ARATH
[Raw transfer]




6 PsiBlast_PDB 79.0953% -16 - C6 -3C58 5.5 FPG_LACLC
3 PsiBlast_PDB 78.9753% -18 - C6 -1PJI 5.0 FPG_LACLC
11 PsiBlast_PDB 78.8353% -21 - C6 -1NNJ 6.5 FPG_LACLC
5 PsiBlast_PDB 78.3253% -16 - C6 -1XC8 5.3 FPG_LACLC
2 PsiBlast_PDB 78.3154% -18 - C6 -1TDZ 5.8 FPG_LACLC
13 PsiBlast_PDB 78.1153% -13 - C6 -4PCZ 7.6 FPG_LACLC
7 PsiBlast_PDB 78.0553% -17 - C6 -2XZF 5.7 FPG_LACLC
10 PsiBlast_PDB 78.0153% -13 - C6 -4PDI 5.7 FPG_LACLC
70 HHSearch 77.9754% -15 - C6 -1PJJ 5.1 FPG_LACLC
8 PsiBlast_PDB 77.9653% -15 - C6 -2XZU 5.7 FPG_LACLC
4 PsiBlast_PDB 77.5653% -17 - C6 -1PM5 4.9 FPG_LACLC
12 PsiBlast_PDB 77.3853% -18 - C6 -1PJJ 5.1 FPG_LACLC
9 PsiBlast_PDB 76.7253% -14 - C6 -4PDG 6.8 FPG_LACLC
14 PsiBlast_PDB 76.1553% -11 - C6 -4PD2 5.4 FPG_LACLC
1 PsiBlast_PDB 76.0254% -16 - C6 -4CIS 2.3 ?
72 HHSearch 76.0054% -9 - C6 -4PD2 5.4 FPG_LACLC
64 PsiBlast_CBE 75.7836%-100 - C6 -1K82 - FPG_ECOLI -
22 PsiBlast_CBE 75.1847% 10 - C6 -1R2Z 7.1 ?
66 HHSearch 75.0048% 8 - C6 -1R2Y 12.9 ?
65 PsiBlast_CBE 74.9136% -98 - C6 -1K82 - FPG_ECOLI -
33 PsiBlast_CBE 74.5146% 10 - C6 -3GPY 10.4 ?
23 PsiBlast_CBE 74.4947% 8 - C6 -1R2Y 13.0 ?
27 PsiBlast_CBE 74.0347% 7 - C6 -2F5S 10.4 ?
15 PsiBlast_PDB 73.8052% -18 - C6 -1KFV 4.9 FPG_LACLC
32 PsiBlast_CBE 73.6446% 9 - C6 -3GQ4 3.4 ?
34 PsiBlast_CBE 73.2446% 9 - C6 -3JR5 10.8 ?
28 PsiBlast_CBE 73.0147% 7 - C6 -2F5Q 5.3 ?
18 PsiBlast_PDB 73.0047% 8 - C6 -1L2B 4.5 ?
17 PsiBlast_PDB 72.7747% 11 - C6 -1L1Z 6.4 ?
19 PsiBlast_PDB 72.4547% 11 - C6 -1L2C 8.3 ?
35 PsiBlast_CBE 72.1246% 9 - C6 -3JR4 3.5 ?
40 PsiBlast_CBE 72.0246% 1 - C6 -4G4N 5.9 ?
16 PsiBlast_PDB 71.9347% 14 - C6 -1L1T 8.4 ?
55 PsiBlast_CBE 71.9246% -4 - C6 -4G4R 8.3 ?
39 PsiBlast_CBE 71.9246% -4 - C6 -3GPP 6.6 ?
20 PsiBlast_PDB 71.8747% 14 - C6 -1L2D 8.1 ?
31 PsiBlast_CBE 71.8547% 2 - C6 -3SAR 7.3 ?
37 PsiBlast_CBE 71.8347% -6 - C6 -3GP1 5.6 ?
51 PsiBlast_CBE 71.7446% -4 - C6 -3U6E 7.3 ?
43 PsiBlast_CBE 71.6346% 4 - C6 -3SAS 5.1 ?
68 HHSearch 71.5247% -3 * C6 *3U6P 7.0 ?
54 PsiBlast_CBE 71.4946% -2 - C6 -4G4O 7.4 ?
25 PsiBlast_CBE 71.4647% -6 - C6 -2F5O 4.7 ?
29 PsiBlast_CBE 71.4547% -4 - C6 -3SAV 4.7 ?
38 PsiBlast_CBE 71.3246% -8 - C6 -3GQ5 6.4 ?
46 PsiBlast_CBE 71.2946% -3 - C6 -3U6Q 8.0 ?
41 PsiBlast_CBE 71.2946% -7 - C6 -3SAW 5.8 ?
24 PsiBlast_CBE 71.2747% 2 - C6 -2F5P 5.1 ?
30 PsiBlast_CBE 71.2447% -2 - C6 -3SAU 4.7 ?
36 PsiBlast_CBE 71.2247% -2 - C6 -3SBJ 5.1 ?
44 PsiBlast_CBE 71.2046% -0 - C6 -4G4Q 4.7 ?
52 PsiBlast_CBE 71.1246% -4 - C6 -3U6D 8.7 ?
26 PsiBlast_CBE 71.0047% -4 - C6 -2F5N 6.0 ?
42 PsiBlast_CBE 70.9646% -4 - C6 -3SAT 4.5 ?
53 PsiBlast_CBE 70.9246% -4 - C6 -3U6C 6.5 ?
47 PsiBlast_CBE 70.9046% -2 - C6 -3U6P 7.5 ?
49 PsiBlast_CBE 70.8746% -3 - C6 -3U6M 6.3 ?
56 PsiBlast_CBE 70.8443% -6 - C6 -3GQ3 6.4 ?
50 PsiBlast_CBE 70.7946% -1 - C6 -3U6L 8.1 ?
45 PsiBlast_CBE 70.7046% -3 - C6 -3U6S 6.8 ?
59 PsiBlast_CBE 70.6943% -4 - C6 -3GPU 5.0 ?
48 PsiBlast_CBE 70.5846% -4 - C6 -3U6O 7.1 ?
57 PsiBlast_CBE 70.4243% -3 - C6 -3GPX 5.9 ?
58 PsiBlast_CBE 70.0643% -4 - C6 -3GO8 6.4 ?
69 HHSearch 55.2530% 26 - C6 -3TWK 0.9 FPG_ARATH
71 HHSearch 51.9330% 29 - C6 -3TWL 2.9 FPG_ARATH