Binding Site Information :
Doc...
Information extracted from the bests complexes created by comparative docking.



Prediction Binding Site :


Binding Site Prediction
[Download fasta file] - [Download text file]

Binding Site Number :C1_S1
Best Complexes choosen after comparative docking [pKd > 3] : 1 (5 maxi)

Complexes [Theoretical pKd]FileVolume (A3)
(FPocket)
Hydrophobicity
Score(FPocket)
Contacts Ligand/Receptor [<4A] in Site C1_S1
Complex: SFG_B_6(2XVA) / Model_96(2XVA/B) = [7.2] Download1098.0330.08MKMEKLVAYKRMPLWNKQTMPEAVQQKHNTKVGTWGKITVLKGALKFIELTEEGEVLAEHLFEAGADNPMAQPQAWHRVEAATDDVEWYLEFYCKPEDYFAKKYNTNPVHSEVLEAMQTVKQGKALDLGCGQGRNSLFLAQQDFDVTAVDQNGLALEILQSIVEQEDLDMPVGLYDINSASIEQEYDFIVSTVVLMFLQADRIPAIIQNMQEKTSVGGYNLIVCAMDTEDYPCSVNFPFTFKEGELADYYKDWELVKYNENPGHLHRRDENGNRIQLRFATLLAKKIK
Consensus
[pKd Mean = 7.20]
-1098
(s=0)
30
(s=0)
MKMEKLVAYKRMPLWNKQTMPEAVQQKHNTKVGTWGKITVLKGALKFIELTEEGEVLAEHLFEAGADNPMAQPQAWHRVEAATDDVEWYLEFYCKPEDYFAKKYNTNPVHSEVLEAMQTVKQGKALDLGCGQGRNSLFLAQQDFDVTAVDQNGLALEILQSIVEQEDLDMPVGLYDINSASIEQEYDFIVSTVVLMFLQADRIPAIIQNMQEKTSVGGYNLIVCAMDTEDYPCSVNFPFTFKEGELADYYKDWELVKYNENPGHLHRRDENGNRIQLRFATLLAKKIK



Statistical distribution of contacts between receptors and ligands in all complexes :
(only contacts < 8A are taken into consideration)


Res_NameRes_NumRes_AtNb_ContactsNb_ComplexesNb[At_Ligand]
VAL113CG2311[O], 1[C], 1[N],
ASP127CG611[N], 3[C], 2[O],
ASP127OD1711[N], 4[C], 2[O],
ASP127OD2611[N], 2[O], 3[C],
LEU128CD2111[C],
CYS130SG712[N], 1[O], 4[C],
GLN132CG412[C], 2[O],
GLN132NE2111[O],
GLN132OE1111[O],
GLN132CD212[O],
ARG134CG711[N], 4[C], 2[O],
ARG134CZ915[C], 2[O], 2[N],
ARG134CD712[O], 4[C], 1[N],
ARG134NE912[O], 5[C], 2[N],
ASN135CG612[O], 3[C], 1[N],
ASN135ND2714[C], 2[O], 1[N],
ASN135OD1511[N], 2[C], 2[O],
SER136OG211[C], 1[N],
VAL149CG2311[C], 2[N],
VAL149CG1111[C],
ASP150OD22516[N], 4[O], 15[C],
ASP150CG2316[N], 14[C], 3[O],
ASP150OD122114[C], 3[O], 5[N],
GLN151CG18110[C], 3[O], 5[N],
GLN151OE11715[N], 9[C], 3[O],
GLN151NE21813[O], 10[C], 5[N],
GLN151CD1713[O], 9[C], 5[N],
ASN152CG711[N], 4[C], 2[O],
ASN152OD1412[C], 2[O],
ASN152ND2711[N], 4[C], 2[O],
LEU174CD1512[N], 1[O], 2[C],
LEU174CG111[C],
TYR175CG211[C], 1[N],
TYR175CD1211[N], 1[C],
ASP176CG814[C], 4[N],
ASP176OD2613[C], 3[N],
ASP176OD11015[N], 5[C],
ILE177CD11615[N], 9[C], 2[O],
ILE177CG11216[C], 1[O], 5[N],
ILE177CG21015[N], 5[C],
ASN178CG915[C], 4[N],
ASN178OD11015[C], 5[N],
ASN178ND2815[C], 3[N],
SER179OG111[N],
VAL190CG2111[N],
SER191OG411[N], 1[O], 2[C],
THR192OG11012[O], 6[C], 2[N],
THR192CG2612[O], 3[C], 1[N],
VAL193CG21318[C], 3[O], 2[N],
VAL193CG11016[C], 2[O], 2[N],
VAL194CG22615[O], 15[C], 6[N],
VAL194CG12417[N], 3[O], 14[C],
MET196CG211[N], 1[C],
MET196SD312[C], 1[N],
MET196CE711[N], 5[C], 1[O],
PHE197CG1914[N], 3[O], 12[C],
PHE197CD11412[O], 9[C], 3[N],
PHE197CD21814[N], 3[O], 11[C],
PHE197CE21713[N], 11[C], 3[O],
PHE197CE11218[C], 1[O], 3[N],
PHE197CZ1319[C], 1[O], 3[N],
LEU198CD21515[N], 2[O], 8[C],
LEU198CD11215[N], 1[O], 6[C],
LEU198CG1211[O], 6[C], 5[N],
ARG202CG211[C], 1[N],
ARG202CD111[N],
ILE206CD1212[N],
PRO238CG111[N],
Total = 68



Download csv file of statistical distribution of contacts