@TOME V2.3
(Mar 2018)

Ref. - - Doc.
Global output mode :
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Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Modeled complexes Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor model: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : spr0891: (2017-12-31 )
MSNFAIILAAGKGTRMKSDLPKVLHKVAGISMLEHVFRSVGAIQPEKTVTVVGHKAELVEEVLAEQTEFVTQSEQLGTGHAVMMTEPILEGLSGHTLVIAGDTPLITGESLKNLIDFHINHKNVATILTAETDNPFGYGRIVRNDNAEVLRIVEQKDATDFEKQIKEINTGTYVFDNERLFEALKNINTNNAQGEYYITDVIGIFRETGEKVGAYTLKDFDESLGVNDRVALATAESVMRRRINHKHMVNGVSFVNPEATYIDIDVEIAPEVQIEANVILKGQTKIGAETVLTNGTYVVDSTIGAGAVITNSMIEESSVADGVTVGPYAHIRPNSSLGAQVHIGNFVEVKGSSIGENTKAGHLTYIGNCEVGSNVNFGAGTITVNYDGKNKYKTVIGDNVFVGSNSTIIAPVELGDNSLVGAGSTITKDVPADAIAIGRGRQINKDEYATRLPHHPKNQ

Atome Classification :

(30 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

GOB_A_4(3TWD)
GLMU_ECOLI
[Raw transfer]



ACO_A_11(2OI5)
GLMU_ECOLI
[Raw transfer]



DCA_A_10(2OI7)
GLMU_ECOLI
[Raw transfer]



COA_B_12(2OI6)
GLMU_ECOLI
[Raw transfer]



ACO_B_12(2OI5)
GLMU_ECOLI
[Raw transfer]



DCA_B_11(2OI7)
GLMU_ECOLI
[Raw transfer]



COA_B_9(1HV9)
GLMU_ECOLI
[Raw transfer]



PG4_A_3(2V0K)
GLMU_HAEIN
[Raw transfer]



PG4_A_9(2VD4)
GLMU_HAEIN
[Raw transfer]



GN1_B_4(2OI7)
GLMU_ECOLI
[Raw transfer]



GP1_B_4(2OI6)
GLMU_ECOLI
[Raw transfer]



GP1_B_4(2OI6)
GLMU_ECOLI
[Raw transfer]



GP1_A_3(2OI6)
GLMU_ECOLI
[Raw transfer]



GN1_A_3(2OI7)
GLMU_ECOLI
[Raw transfer]



CIT_C_9(5VMK)
?
[Raw transfer]



GP1_A_5(3ST8)
GLMU_MYCTU
[Raw transfer]



CIT_B_6(5VMK)
?
[Raw transfer]



CIT_B_6(5VMK)
?
[Raw transfer]
4 PsiBlast_PDB 91.6099%-104 - C2 -1HM8 - GLMU_STRPN -
22 PsiBlast_CBE 91.4699%-103 - C2 -1HM8 - GLMU_STRPN -
113 Fugue 91.4399%-104 - C2 -1HM9 - GLMU_STRPN -
3 PsiBlast_PDB 91.4399%-104 - C2 -1HM9 - GLMU_STRPN -
21 PsiBlast_CBE 91.1499%-103 - C2 -1HM9 - GLMU_STRPN -
2 PsiBlast_PDB 91.14100%-106 - C2 -4AC3 - GLMU_STRR6 -
1 PsiBlast_PDB 90.52100%-108 - C2 -4AAW - GLMU_STRR6 -
7 PsiBlast_PDB 90.5098%-106 - C2 -1G97 - GLMU_STRPN -
6 PsiBlast_PDB 89.9798%-108 - C2 -1G95 - GLMU_STRPN -
5 PsiBlast_PDB 86.2299%-107 - C2 -1HM0 - GLMU_STRPN -
123 HHSearch 83.1397% -53 - C2 -4AC3 - GLMU_STRR6 -
124 HHSearch 82.2296% -47 - C2 -1HM9 - GLMU_STRPN -
12 PsiBlast_PDB 66.2841% -3 - C2 -3ST8 2.6 GLMU_MYCTU
19 PsiBlast_PDB 66.1443% -18 - C2 -5VMK 3.2 ?
16 PsiBlast_PDB 66.0941% 0 - C2 -4G3Q - GLMU_MYCTU -
126 HHSearch 65.8341% -3 - C2 -4G3Q - GLMU_MYCTU -
11 PsiBlast_PDB 65.2841% -4 - C2 -3SPT - GLMU_MYCTU -
20 PsiBlast_PDB 65.1942% -14 - C2 -2V0H - GLMU_HAEIN -
18 PsiBlast_PDB 65.1141% -1 - C2 -4K6R - GLMU_MYCTO -
33 PsiBlast_CBE 65.0842% -13 - C2 -2VD4 1.7 GLMU_HAEIN
40 PsiBlast_CBE 64.9540% -20 - C2 -2OI6 4.2 GLMU_ECOLI
127 HHSearch 64.7940% -23 - C2 -2OI6 2.5 GLMU_ECOLI
39 PsiBlast_CBE 64.6740% -17 - C2 -2OI7 4.3 GLMU_ECOLI
41 PsiBlast_CBE 63.9440% -19 - C2 -2OI6 2.4 GLMU_ECOLI
42 PsiBlast_CBE 63.9140% -20 - C2 -2OI5 4.7 GLMU_ECOLI
24 PsiBlast_CBE 63.6643% -25 - C2 -5VMK 3.3 ?
38 PsiBlast_CBE 63.5840% -18 - C2 -2OI7 4.5 GLMU_ECOLI
43 PsiBlast_CBE 63.1340% -18 - C2 -2OI5 4.4 GLMU_ECOLI
125 HHSearch 61.7842% -22 - C2 -5VMK 3.2 ?
55 PsiBlast_CBE 39.6839% -36 - C2 -3TWD 4.1 GLMU_ECOLI