@TOME V2.3
(Mar 2018)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Modeled complexes Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor model: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : spr0918: (2018-01-01 )
MGYTVAVVGATGAVGAQMIKMLEESTLPIDKIRYLASARSAGKSLKFKDQDITIEETTETAFEGVDIALFSAGSSTSAKYAPYAVKAGVVVVDNTSYFRQNPDVPLVVPEVNAHALDAHNGIIACPNCSTIQMMVALEPVRQKWGLDRIIVSTYQAVSGAGMGAILETQRELREVLNDGVKPCDLHAEILPSGGDKKHYPIAFNALPQIDVFTDNDYTYEEMKMTKETKKIMEDDSIAVSATCVRIPVLSAHSESVYIETKEVAPIEEVKAAIAAFPGAVLEDDVAHQIYPQAINAVGSRDTFVGRIRKDLDAEKGIHMWVVSDNLLKGAAWNSVQIAETLHERGLVRPTAELKFELK

Atome Classification :

(32 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

25A_A_3(3PWK)
?
[Raw transfer]



NAP_A_5(4R3N)
?
[Raw transfer]



25A_B_10(3PWK)
?
[Raw transfer]



NAP_A_4(4R41)
?
[Raw transfer]



NAP_A_3(3PYX)
?
[Raw transfer]



A2P_A_8(4R3W)
?
[Raw transfer]



NAP_A_4(4R4J)
?
[Raw transfer]



NAP_B_12(4R3N)
?
[Raw transfer]



NAP_A_4(3PZB)
?
[Raw transfer]



NAP_B_14(4R41)
?
[Raw transfer]



NAP_A_5(4R54)
?
[Raw transfer]



A2P_A_5(3PWS)
?
[Raw transfer]



NAP_B_15(4R5H)
?
[Raw transfer]



NAP_A_6(4R51)
?
[Raw transfer]



NAP_A_5(4R3N)
?
[Raw transfer]



NAP_B_11(4R4J)
?
[Raw transfer]



NAP_B_9(3PZB)
?
[Raw transfer]



NAP_A_10(4R5H)
?
[Raw transfer]



NAP_B_15(4R51)
?
[Raw transfer]



A2P_B_16(4R3W)
?
[Raw transfer]



NAP_A_3(3Q11)
?
[Raw transfer]



A2P_B_7(3PWS)
?
[Raw transfer]



NAP_B_9(3PYX)
?
[Raw transfer]



NAP_B_9(4R54)
?
[Raw transfer]



NAP_B_9(3Q11)
?
[Raw transfer]



GOL_A_2(3VOS)
DHAS_MYCTU
[Raw transfer]



CYS_A_2(3TZ6)
DHAS_MYCTU
[Raw transfer]



CYS_A_2(3TZ6)
DHAS_MYCTU
[Raw transfer]



CYS_B_4(3PZR)
DHAS1_VIBCH
[Raw transfer]
24 PsiBlast_CBE 97.93100% -92 - C3 -4R4J 10.3 ?
22 PsiBlast_CBE 97.68100% -95 - C3 -4R54 7.6 ?
35 PsiBlast_CBE 97.57100% -98 - C3 -3PYL - ? -
5 PsiBlast_PDB 97.56100% -95 - C3 -3PWK 6.9 ?
21 PsiBlast_CBE 97.47100% -93 - C3 -4R5H 7.8 ?
12 PsiBlast_PDB 97.45100% -95 - C3 -4R3N 11.2 ?
37 PsiBlast_CBE 97.37100% -95 - C3 -3PWK 7.4 ?
31 PsiBlast_CBE 97.35100% -91 - C3 -3Q11 8.1 ?
8 PsiBlast_PDB 97.31100% -92 - C3 -3PYX 11.1 ?
16 PsiBlast_PDB 97.28100% -97 - C3 -4R51 10.7 ?
14 PsiBlast_PDB 97.24100% -93 - C3 -4R41 8.3 ?
29 PsiBlast_CBE 97.09100% -96 - C3 -3Q1L - ? -
15 PsiBlast_PDB 96.99100% -90 - C3 -4R4J 11.1 ?
13 PsiBlast_PDB 96.93100% -94 - C3 -4R3W 6.4 ?
3 PsiBlast_PDB 96.85100% -95 - C3 -2GZ2 - ? -
34 PsiBlast_CBE 96.81100% -95 - C3 -3PYL - ? -
23 PsiBlast_CBE 96.78100% -99 - C3 -4R51 7.8 ?
6 PsiBlast_PDB 96.71100% -95 - C3 -3PWS 6.6 ?
32 PsiBlast_CBE 96.70100% -93 - C3 -3PZB 11.3 ?
17 PsiBlast_PDB 96.53100% -94 - C3 -4R54 11.2 ?
9 PsiBlast_PDB 96.50100% -92 - C3 -3PZB 11.1 ?
10 PsiBlast_PDB 96.46100% -93 - C3 -3Q11 9.0 ?
18 PsiBlast_PDB 96.40100% -93 - C3 -4R5H 10.6 ?
36 PsiBlast_CBE 96.19100% -94 - C3 -3PWS 6.7 ?
33 PsiBlast_CBE 96.14100% -90 - C3 -3PYX 11.3 ?
27 PsiBlast_CBE 96.06100%-100 - C3 -4R3N 10.5 ?
26 PsiBlast_CBE 96.05100% -96 - C3 -4R3W 5.7 ?
25 PsiBlast_CBE 95.30100% -96 - C3 -4R41 7.7 ?
50 HHSearch 89.9098% -47 - C3 -4R3N 11.1 ?
43 PsiBlast_CBE 66.4839% -36 - C3 -3TZ6 2.7 DHAS_MYCTU
64 HHSearch 66.0640% -28 - C3 -3TZ6 2.7 DHAS_MYCTU
44 PsiBlast_CBE 65.1939% -34 - C3 -3VOS 2.4 DHAS_MYCTU