@TOME V2.3
(Mar 2018)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Modeled complexes Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor model: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : spr0928: (2018-01-01 )
MIFDKDDFKAYDADLWNAIAKEEERQQNNIELIASENVVSKAVMAAQGSILTNKYAEGYPGRRYYGGTDVVDVVETLAIERAKEIFGAKFANVQPHSGSQANCAAYMSLIEPGDTVMGMDLAAGGHLTHGAPVSFSGQTYNFLSYSVDPETELLDFDAILKQAQEVKPKLIVAGASAYSQIIDFSKFREIADAVGAKLMVDMAHIAGLVAAGLHPSPVPYAHITTTTTHKTLRGPRGGLILTNDEELAKKINSAIFPGIQGGPLEHVVAAKAVSFKEVLDPAFKEYAANVIKNSKAMADVFLQDPDFRIISGGTENHLFLVDVTKVVENGKVAQNLLDEVNITLNKNSIPYETLSPFKTSGIRIGAAAITARGFGEEESRKVAELIIKTLKNSENEAVLEEVRSAVKELTDAFPLYED

Atome Classification :

(72 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

2BO_C_6(4WXG)
GLYA_STRT1
[Raw transfer]



PLG_C_6(4WXF)
GLYA_STRT1
[Raw transfer]



2BO_C_6(4WXG)
GLYA_STRT1
[Raw transfer]



FON_H_8(1KL2)
?
[Raw transfer]



ALO_A_3(2W7G)
?
[Raw transfer]



GLY_A_2(2VGT)
?
[Raw transfer]



GLY_A_2(2VMQ)
?
[Raw transfer]



ALO_A_3(2VMX)
?
[Raw transfer]



PLG_A_4(1RVY)
GLYC_RABIT
[Raw transfer]



PLP_C_3(1YJS)
?
[Raw transfer]



GOL_A_3(4PVF)
GLYM_HUMAN
[Raw transfer]



GOL_B_5(4PVF)
GLYM_HUMAN
[Raw transfer]



PLP_A_3(2VMT)
?
[Raw transfer]



PLP_A_3(2VMO)
?
[Raw transfer]



PLP_A_3(2W7K)
?
[Raw transfer]



GOL_A_3(4PVF)
GLYM_HUMAN
[Raw transfer]



PLP_A_3(2VMQ)
?
[Raw transfer]



PLP_A_3(2VGV)
?
[Raw transfer]



PLP_C_3(1KKP)
?
[Raw transfer]



PLP_A_3(2W7J)
?
[Raw transfer]



PLP_A_2(2VMX)
?
[Raw transfer]



PLP_A_3(2VMW)
?
[Raw transfer]



PLP_A_3(2W7H)
?
[Raw transfer]



PLP_A_3(2VGT)
?
[Raw transfer]



PLP_C_3(1KL1)
?
[Raw transfer]



PLP_A_2(2W7G)
?
[Raw transfer]



PLP_A_3(2VMP)
?
[Raw transfer]



PLP_A_3(2W7M)
?
[Raw transfer]



PLP_A_3(2VIA)
?
[Raw transfer]



PLP_A_3(2W7F)
?
[Raw transfer]



PLP_A_3(2VIB)
?
[Raw transfer]



PLP_A_3(2VGU)
?
[Raw transfer]



PLP_C_3(1YJZ)
?
[Raw transfer]



PLP_A_2(2W7L)
?
[Raw transfer]



PLP_A_3(2W7E)
?
[Raw transfer]



PLP_A_3(2VI9)
?
[Raw transfer]



PLP_A_2(2VI8)
?
[Raw transfer]



PLP_A_2(2VMR)
?
[Raw transfer]



PLP_B_6(2DKJ)
GLYA_THET8
[Raw transfer]



PLP_A_2(2W7I)
?
[Raw transfer]



PLP_A_3(1KKJ)
?
[Raw transfer]



PLP_A_3(2VMS)
?
[Raw transfer]



PLP_A_3(2VGW)
?
[Raw transfer]



PLP_A_2(2VI8)
?
[Raw transfer]



PLP_A_2(2VMV)
?
[Raw transfer]



PLP_A_3(2VMU)
?
[Raw transfer]



PLP_B_4(1CJ0)
GLYC_RABIT
[Raw transfer]



PLP_A_9(1RV4)
GLYC_RABIT
[Raw transfer]



PLP_A_2(2VGS)
?
[Raw transfer]



PLP_B_9(1RVU)
GLYC_RABIT
[Raw transfer]



PLP_A_6(1RV3)
GLYC_RABIT
[Raw transfer]



PLP_B_6(2DKJ)
GLYA_THET8
[Raw transfer]



PLP_A_5(2DKJ)
GLYA_THET8
[Raw transfer]



PLP_A_2(2VMN)
?
[Raw transfer]



PLP_A_7(1RVU)
GLYC_RABIT
[Raw transfer]



PLP_A_2(2W7D)
?
[Raw transfer]



PLP_A_3(2VMZ)
?
[Raw transfer]



PLP_B_5(1RVY)
GLYC_RABIT
[Raw transfer]



PLP_A_2(2VMN)
?
[Raw transfer]



PLP_B_11(1RV4)
GLYC_RABIT
[Raw transfer]



PLP_B_7(1RV3)
GLYC_RABIT
[Raw transfer]



PLP_B_7(1RV3)
GLYC_RABIT
[Raw transfer]



PLP_A_3(1CJ0)
GLYC_RABIT
[Raw transfer]



PLP_C_3(1YJY)
?
[Raw transfer]



FON_G_7(1KL2)
?
[Raw transfer]



PLP_A_2(1BJ4)
GLYC_HUMAN
[Raw transfer]



FFO_B_8(2VMY)
?
[Raw transfer]



PLP_A_2(1BJ4)
GLYC_HUMAN
[Raw transfer]



FFO_A_6(2VMY)
?
[Raw transfer]



PLP_A_2(3G8M)
GLYA_ECOLI
[Raw transfer]
1 PsiBlast_PDB 96.1981% -75 - C1 -4WXG - GLYA_STRT1 -
21 PsiBlast_CBE 95.6981% -76 - C1 -4WXG 6.5 GLYA_STRT1
22 PsiBlast_CBE 95.6681% -75 - C1 -4WXF 5.4 GLYA_STRT1
3 PsiBlast_PDB 95.1081% -76 - C1 -4WXB - GLYA_STRT1 -
23 PsiBlast_CBE 95.0281% -77 - C1 -4WXB - GLYA_STRT1 -
2 PsiBlast_PDB 94.8281% -76 - C1 -4WXF - GLYA_STRT1 -
25 PsiBlast_CBE 94.1681% -84 - C1 -4WXB - GLYA_STRT1 -
24 PsiBlast_CBE 93.6781% -81 - C1 -4WXB - GLYA_STRT1 -
16 PsiBlast_PDB 87.5263% -85 - C1 -2VGT 4.0 ?
41 PsiBlast_CBE 87.2363% -84 - C1 -2VMT 4.6 ?
9 PsiBlast_PDB 87.0763% -86 - C1 -2VI8 4.4 ?
15 PsiBlast_PDB 86.8163% -84 - C1 -2VGS 4.3 ?
20 PsiBlast_PDB 86.7663% -87 - C1 -2W7D 4.5 ?
47 PsiBlast_CBE 86.7363% -84 - C1 -2VMX 4.1 ?
49 PsiBlast_CBE 86.6663% -84 - C1 -2VMV 4.3 ?
31 PsiBlast_CBE 86.6663% -84 - C1 -2VMQ 4.3 ?
19 PsiBlast_PDB 86.6563% -84 - C1 -2VGU 4.3 ?
32 PsiBlast_CBE 86.5663% -85 - C1 -2VMP 4.3 ?
4 PsiBlast_PDB 86.5164% -83 - C1 -1KKJ 3.2 ?
45 PsiBlast_CBE 86.4763% -83 - C1 -2VMY 4.0 ?
46 PsiBlast_CBE 86.2763% -85 - C1 -2VMY 4.1 ?
28 PsiBlast_CBE 86.2663% -83 - C1 -2W7G 3.4 ?
43 PsiBlast_CBE 86.1563% -85 - C1 -2VMR 4.4 ?
40 PsiBlast_CBE 86.0663% -84 - C1 -2VMU 3.1 ?
29 PsiBlast_CBE 86.0263% -82 - C1 -2W7F 3.3 ?
27 PsiBlast_CBE 85.9963% -85 - C1 -2W7H 3.2 ?
44 PsiBlast_CBE 85.9663% -85 - C1 -2VMZ 3.0 ?
33 PsiBlast_CBE 85.9563% -84 - C1 -2VMO 3.7 ?
10 PsiBlast_PDB 85.9263% -84 - C1 -2VIB 3.7 ?
5 PsiBlast_PDB 85.9064% -81 - C1 -1KKP 4.4 ?
48 PsiBlast_CBE 85.8963% -82 - C1 -2VMW 4.3 ?
34 PsiBlast_CBE 85.8963% -83 - C1 -2VMN 4.5 ?
38 PsiBlast_CBE 85.8863% -83 - C1 -2W7J 4.3 ?
12 PsiBlast_PDB 85.8763% -83 - C1 -2VI9 3.9 ?
35 PsiBlast_CBE 85.8263% -84 - C1 -2W7M 4.3 ?
26 PsiBlast_CBE 85.7664% -82 - C1 -1KL2 5.0 ?
6 PsiBlast_PDB 85.6564% -84 - C1 -1KL1 4.5 ?
30 PsiBlast_CBE 85.6263% -83 - C1 -2W7E 4.3 ?
42 PsiBlast_CBE 85.6063% -85 - C1 -2VMS 3.1 ?
14 PsiBlast_PDB 85.6063% -86 - C1 -1YJZ 3.8 ?
17 PsiBlast_PDB 85.5263% -84 - C1 -2VGV 4.3 ?
18 PsiBlast_PDB 85.4563% -82 - C1 -2VGW 4.1 ?
8 PsiBlast_PDB 85.4063% -84 - C1 -1YJS 4.4 ?
13 PsiBlast_PDB 85.3763% -86 - C1 -1YJY 4.1 ?
121 HHSearch 85.3561% -77 - C1 -2DKJ 3.1 GLYA_THET8
11 PsiBlast_PDB 85.2963% -82 - C1 -2VIA 4.0 ?
36 PsiBlast_CBE 85.2463% -85 - C1 -2W7L 4.4 ?
7 PsiBlast_PDB 85.2364% -81 - C1 -1KL2 4.1 ?
39 PsiBlast_CBE 84.9163% -83 - C1 -2W7I 4.4 ?
37 PsiBlast_CBE 84.7563% -83 - C1 -2W7K 4.1 ?
51 PsiBlast_CBE 84.2363% -77 - C1 -2DKJ 3.2 GLYA_THET8
50 PsiBlast_CBE 83.4863% -77 - C1 -2DKJ 3.1 GLYA_THET8
103 HHSearch 78.6780% 16 - C1 -4WXG 6.5 GLYA_STRT1
62 PsiBlast_CBE 73.5358% -18 - C1 -3G8M 4.3 GLYA_ECOLI
117 HHSearch 71.3962% 3 - C1 -2VI8 4.4 ?
120 HHSearch 70.5262% 5 * C1 *2VMN 4.5 ?
106 HHSearch 64.3744% -8 - C1 -1RV3 3.7 GLYC_RABIT
97 PsiBlast_CBE 62.8240% -19 - C1 -1BJ4 2.7 GLYC_HUMAN
102 HHSearch 61.4144% 6 - C1 -4PVF 2.3 GLYM_HUMAN
90 PsiBlast_CBE 61.0043% -12 - C1 -1RVY 2.8 GLYC_RABIT
92 PsiBlast_CBE 60.8343% -12 - C1 -1RVU 2.5 GLYC_RABIT
96 PsiBlast_CBE 60.1443% -13 - C1 -1RV3 2.8 GLYC_RABIT
89 PsiBlast_CBE 59.6743% -2 - C1 -1RVY 3.5 GLYC_RABIT
91 PsiBlast_CBE 59.6643% -2 - C1 -1RVU 3.2 GLYC_RABIT
126 Fugue 59.6043% 6 - C1 -1BJ4 2.7 GLYC_HUMAN
94 PsiBlast_CBE 59.5443% -13 - C1 -1RV4 3.5 GLYC_RABIT
83 PsiBlast_CBE 58.8342% -6 - C1 -4PVF 2.3 GLYM_HUMAN
82 PsiBlast_CBE 58.7042% -5 - C1 -4PVF 2.6 GLYM_HUMAN
95 PsiBlast_CBE 58.5843% -3 - C1 -1RV3 3.7 GLYC_RABIT
85 PsiBlast_CBE 58.3943% -10 - C1 -1CJ0 4.2 GLYC_RABIT
93 PsiBlast_CBE 57.3643% -3 - C1 -1RV4 3.8 GLYC_RABIT
84 PsiBlast_CBE 56.8443% -1 - C1 -1CJ0 4.7 GLYC_RABIT