@TOME V2.3
(Mar 2018)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Modeled complexes Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor model: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : spr0934: (2018-01-01 )
MKNKFFLIAILAMCIVFSACSSNSVKNEENTSKEHAPDKIVLDHAFGQTILDKKPERVATIAWGNHDVALALGIVPVGFSKANYGVSADKGVLPWTEEKIKELNGKANLFDDLDGLNFEAISNSKPDVILAGYSGITKEDYDTLSKIAPVAAYKSKPWQTLWRDMIKIDSKALGMEKEGDELIKNTEARISKELEKHPEIKGKIKGKKVLFTMINAADTSKFWIYTSKDPRANYLTDLGLVFPESLKEFESEDSFAKEISAEEANKINDADVIITYGDDKTLEALQKDPLLGKINAIKNGAVAVIPDNTPLAASCTPTPLSINYTIEEYLNLLGNACKNAK

Atome Classification :

(20 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

6L0_A_4(5JJ5)
?
[Raw transfer]




6L0_B_9(5JJ5)
?
[Raw transfer]




6L0_A_4(5JJ5)
?
[Raw transfer]




FCE_A_3(4HMQ)
?
[Raw transfer]




FCE_B_19(4HMQ)
?
[Raw transfer]




B3P_A_2(4H59)
?
[Raw transfer]




B3P_A_2(4H59)
?
[Raw transfer]




B3P_A_4(4HMO)
?
[Raw transfer]




4 PsiBlast_PDB 97.04100% -99 - C2 -5JJ5 9.6 ?
1 PsiBlast_PDB 96.39100% -92 - C2 -4HMO 2.3 ?
22 PsiBlast_CBE 96.34100% -96 - C2 -5JJ5 9.4 ?
5 PsiBlast_PDB 95.6399% -94 - C2 -4H59 4.3 ?
21 PsiBlast_CBE 94.69100% -91 - C2 -4HMQ 7.4 ?
2 PsiBlast_PDB 94.40100% -95 - C2 -4HMQ 7.4 ?
3 PsiBlast_PDB 92.2499% -98 - C2 -4HMP - ? -
23 PsiBlast_CBE 91.9599%-101 - C2 -4HMP - ? -
43 HHSearch 90.4997% -56 - C2 -5JJ5 9.4 ?
44 HHSearch 89.2397% -54 - C2 -4H59 4.0 ?
61 HHSearch 58.9126% 7 - C2 -4MDY - ? -
55 HHSearch 53.3822% -52 - C2 -3TNY - ? -
60 HHSearch 52.6323% 13 - C2 -4PM4 - ? -
46 HHSearch 51.1022% -5 * C2 *3LHS - ? -
6 PsiBlast_PDB 51.0028% 9 - C2 -4MDY - ? -
20 PsiBlast_PDB 50.7325% 2 - C2 -3LHS - ? -
19 PsiBlast_PDB 50.1525% 1 - C2 -3EIW - ? -
47 HHSearch 50.0122% -2 - C2 -3EIW - ? -
7 PsiBlast_PDB 49.6127% -16 - C2 -3TNY - ? -
18 PsiBlast_PDB 47.9123% -49 - C2 -4JCC - ? -