@TOME V2.3
(Mar 2018)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Modeled complexes Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor model: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : spr0979: (2018-01-02 )
MATKQKEVTTFDVQVAEFIRNHKQKGTATDDEINASLVIPFTLDADGIEDLLQRIQDAGISITDNEGNPSARVLSNEEEPELSDEDLIGSTSAKVNDPVRMYLKEIGVVPLLTNEEEKELALAVEAGDIEAKQRLAEANLRLVVSIAKRYVGRGMQFLDLIQEGNMGLMKAVDKFDYSKGFKFSTYATWWIRQAITRAIADQARTIRIPVHMVETINKLVREQRNLLQELGQDPTPEQIAERMDMTPDKVREILKIAQEPVSLETPIGEEDDSHLGDFIEDEVIENPVDYTTRIVLREQLDEILDTLTDREENVLRLRFGLDDGKMRTLEDVGKVFNVTRERIRQIEAKALRKLRQPSRSKPLRDFIED

Atome Classification :

(66 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

NACID_Q_17(4XLR)
SIGA_THEAQ
[Raw transfer]
-
NACID_V_22(5I2D)
?
[Raw transfer]
-
NACID_K_11(5I2D)
?
[Raw transfer]
-
NACID_G_7(5E17)
?
[Raw transfer]
-
NACID_T_20(4XLR)
SIGA_THEAQ
[Raw transfer]
-
NACID_Q_15(4XLN)
SIGA_THEAQ
[Raw transfer]
-
NACID_I_8(5E18)
?
[Raw transfer]
-
NACID_T_18(4XLN)
SIGA_THEAQ
[Raw transfer]
-
NACID_T_18(4XLN)
SIGA_THEAQ
[Raw transfer]
-
NACID_H_7(5UH9)
SIGA_MYCTU
[Raw transfer]
-
NACID_H_7(5UHE)
SIGA_MYCTU
[Raw transfer]
-
NACID_H_7(5UHG)
SIGA_MYCTU
[Raw transfer]
-
NACID_H_7(5UHA)
SIGA_MYCTU
[Raw transfer]
-
NACID_H_8(4OIO)
?
[Raw transfer]
-
NACID_H_7(5UH5)
SIGA_MYCTU
[Raw transfer]
-
NACID_H_7(5UHC)
SIGA_MYCTU
[Raw transfer]
-
NACID_H_7(5UHD)
SIGA_MYCTU
[Raw transfer]
-
NACID_H_7(5UHB)
SIGA_MYCTU
[Raw transfer]
-
NACID_H_8(4OIN)
?
[Raw transfer]
-
NACID_H_7(5UHF)
SIGA_MYCTU
[Raw transfer]
-
NACID_H_7(5UH8)
SIGA_MYCTU
[Raw transfer]
-
NACID_H_7(5UH6)
SIGA_MYCTU
[Raw transfer]
-
NACID_H_8(4Q5S)
?
[Raw transfer]
-
NACID_H_8(4OIP)
?
[Raw transfer]
-
NACID_H_8(4G7H)
?
[Raw transfer]
-
NACID_H_8(5VO8)
?
[Raw transfer]
-
NACID_H_13(4G7Z)
?
[Raw transfer]
-
NACID_H_8(4G7O)
?
[Raw transfer]
-
NACID_H_8(4OIR)
?
[Raw transfer]
-
NACID_H_8(4OIQ)
?
[Raw transfer]
-
NACID_B_2(3UGP)
SIGA_THEAQ
[Raw transfer]
-
NACID_G_7(4Q4Z)
?
[Raw transfer]
-
NACID_B_2(3UGO)
SIGA_THEAQ
[Raw transfer]
-
NACID_B_2(3UGO)
SIGA_THEAQ
[Raw transfer]
-
NACID_R_16(4G7H)
?
[Raw transfer]
-
NACID_R_15(4G7Z)
?
[Raw transfer]
-
NACID_P_16(4XLS)
SIGA_THEAQ
[Raw transfer]
-
NACID_D_1(4KI2)
SIGA_THEAQ
[Raw transfer]
-
NACID_R_17(4G7O)
?
[Raw transfer]
-
NACID_E_2(4KI2)
SIGA_THEAQ
[Raw transfer]
-
NACID_S_18(4XLS)
SIGA_THEAQ
[Raw transfer]
-
NACID_M_5(3N97)
SIGA_THEAQ
[Raw transfer]
-
NACID_B_1(1KU7)
SIGA_THEAQ
[Raw transfer]
-
NACID_G_7(5TJG)
?
[Raw transfer]
-
NACID_R_15(5D4C)
?
[Raw transfer]
-
NACID_G_8(5D4E)
?
[Raw transfer]
-
NACID_R_15(5D4E)
?
[Raw transfer]
-
NACID_G_7(5D4D)
?
[Raw transfer]
-
NACID_G_7(5D4C)
?
[Raw transfer]
-
NACID_R_15(5D4D)
?
[Raw transfer]
-
98 HHSearch 77.1965% 58 - C4 -4XLN 2.0 SIGA_THEAQ
20 PsiBlast_PDB 76.4067%-123 - C4 -4LK1 - RPOD_ECOLI -
13 PsiBlast_PDB 75.2559% 33 - C4 -5VI8 - ? -
12 PsiBlast_PDB 75.2259% 32 - C4 -5TW1 - ? -
21 PsiBlast_CBE 74.2867%-119 - C4 -4KN4 - RPOD_ECOLI -
22 PsiBlast_CBE 73.9867%-116 - C4 -4KMU - RPOD_ECOLI -
18 PsiBlast_PDB 73.7067%-128 - C4 -4KN4 - RPOD_ECOLI -
25 PsiBlast_CBE 73.5267% 0 - C- -4YLP - RPOD_ECOLI -
24 PsiBlast_CBE 73.5267% 0 - C- -4YLP - RPOD_ECOLI -
19 PsiBlast_PDB 73.3367%-124 - C4 -4KN7 - RPOD_ECOLI -
16 PsiBlast_PDB 73.1367%-124 - C4 -4JK2 - RPOD_ECOLI -
34 PsiBlast_CBE 73.1163% 0 - C- -2A68 - ? -
33 PsiBlast_CBE 73.1163% 0 - C- -2A68 - ? -
32 PsiBlast_CBE 73.1163% 0 - C- -2A69 - ? -
15 PsiBlast_PDB 73.0367%-121 - C4 -4JK1 - RPOD_ECOLI -
17 PsiBlast_PDB 72.9667%-126 - C4 -4KMU - RPOD_ECOLI -
99 HHSearch 72.2265% 20 - C4 -1L9U - SIGA_THEAQ -
4 PsiBlast_PDB 72.1559% 43 - C4 -5UH9 12.0 SIGA_MYCTU
5 PsiBlast_PDB 72.1459% 42 - C4 -5UHA 13.0 SIGA_MYCTU
9 PsiBlast_PDB 71.9459% 42 - C4 -5UHE 12.6 SIGA_MYCTU
7 PsiBlast_PDB 71.7259% 41 - C4 -5UHC 12.1 SIGA_MYCTU
11 PsiBlast_PDB 71.3759% 42 - C4 -5UHG 12.0 SIGA_MYCTU
1 PsiBlast_PDB 71.3659% 41 - C4 -5UH5 11.8 SIGA_MYCTU
2 PsiBlast_PDB 71.2259% 41 - C4 -5UH6 13.0 SIGA_MYCTU
8 PsiBlast_PDB 70.6059% 39 - C4 -5UHD 13.1 SIGA_MYCTU
10 PsiBlast_PDB 70.5459% 44 - C4 -5UHF 11.9 SIGA_MYCTU
3 PsiBlast_PDB 70.4159% 45 - C4 -5UH8 11.9 SIGA_MYCTU
6 PsiBlast_PDB 70.1459% 39 - C4 -5UHB 13.0 SIGA_MYCTU
52 PsiBlast_CBE 68.6963% 8 - C4 -4OIQ 11.2 ?
49 PsiBlast_CBE 68.6563% 8 - C4 -5D4C 2.1 ?
56 PsiBlast_CBE 68.5763% 0 - C4 -4G7Z 12.0 ?
42 PsiBlast_CBE 68.4663% 0 - C4 -5I2D Error ?
58 PsiBlast_CBE 68.4163% 7 - C4 -4G7O 11.8 ?
41 PsiBlast_CBE 68.3463% 10 - C4 -5I2D Error ?
30 PsiBlast_CBE 68.3363% 7 - C4 -4Q4Z 2.5 ?
54 PsiBlast_CBE 68.2763% 7 - C4 -4OIO 11.8 ?
51 PsiBlast_CBE 68.2763% 11 - C4 -4OIR 10.4 ?
62 PsiBlast_CBE 68.1265% 10 - C4 -5TJG 12.9 ?
28 PsiBlast_CBE 68.0763% -3 - C4 -5VO8 12.4 ?
61 PsiBlast_CBE 68.0563% 14 - C4 -4G7H 11.8 ?
60 PsiBlast_CBE 68.0263% 4 - C4 -4G7H 11.7 ?
59 PsiBlast_CBE 68.0063% 14 - C4 -4G7O 11.1 ?
63 PsiBlast_CBE 67.9365% 9 - C4 -4XLS 4.2 SIGA_THEAQ
48 PsiBlast_CBE 67.8663% 8 - C4 -5D4D 2.1 ?
55 PsiBlast_CBE 67.7763% 7 - C4 -4OIN 10.6 ?
68 PsiBlast_CBE 67.7365% 2 - C4 -4XLN 3.0 SIGA_THEAQ
64 PsiBlast_CBE 67.5565% 10 - C4 -4XLS 4.2 SIGA_THEAQ
67 PsiBlast_CBE 67.5465% -1 - C4 -4XLN 2.0 SIGA_THEAQ
66 PsiBlast_CBE 67.3765% -2 - C4 -4XLR Error SIGA_THEAQ
45 PsiBlast_CBE 67.3563% 13 - C4 -5D4E 2.0 ?
50 PsiBlast_CBE 67.2863% 14 - C4 -5D4C 2.4 ?
53 PsiBlast_CBE 67.2463% 13 - C4 -4OIP 11.8 ?
65 PsiBlast_CBE 67.1365% -2 - C4 -4XLR Error SIGA_THEAQ
57 PsiBlast_CBE 66.8663% 16 - C4 -4G7Z 11.8 ?
46 PsiBlast_CBE 66.5063% -0 - C4 -5D4E 2.2 ?
44 PsiBlast_CBE 66.0963% 10 - C4 -5E17 Error ?
43 PsiBlast_CBE 66.0563% 0 - C4 -5E18 3.4 ?
29 PsiBlast_CBE 65.6263% 2 - C4 -4Q5S 12.8 ?
47 PsiBlast_CBE 62.2463% -31 - C4 -5D4D 2.3 ?
101 HHSearch 51.4370% 17 - C4 -3UGO 14.9 SIGA_THEAQ
71 PsiBlast_CBE 50.6873% -75 - C4 -4KI2 12.7 SIGA_THEAQ
74 PsiBlast_CBE 50.1873%-155 - C4 -3UGO 14.7 SIGA_THEAQ
72 PsiBlast_CBE 50.0673%-154 - C4 -4KI2 11.6 SIGA_THEAQ
73 PsiBlast_CBE 49.7173%-152 - C4 -3UGP 14.5 SIGA_THEAQ
81 PsiBlast_CBE 41.4958% -61 - C4 -1KU7 3.5 SIGA_THEAQ
79 PsiBlast_CBE 38.9763% -79 - C4 -3N97 3.4 SIGA_THEAQ